Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1241 ATGGCTAACAGAACTACACTTTTGGTCTTGCTGGTCCTTGTTCTTTGTCATGGAGTGGGTGTAACAATGGGGTTGTGGATGAAAGAGGTGGAACAAGATAAAAAACATTGGCATCCAATGTCAGATAAGTTATTTTTGATGCAAAACTCAAAGCATATAGTGAAGACTGATGCTGGGGAAATGAGAGTGCTAGAAAGCTATGGTGGTAGGATTATGGATAGGCGATTGAATATTGGTTTCATCACTATGGAACCAAGGTCACTCTTCATTCCTCAGTATCTTGATTCCACTTTCATCATATTCCTGCGTGCAGGGGAAGCAAAGGTGGGATTTGTGTGTAAATCTAAACTGGTGGAAAAGCACTTGAAGATGGGTGATGTGTATCGAATTCCAGCTGGTTCTGCTTTCTATTTGGTGAATACAATGGATGATCAGAGACTTCACATAATCTGCAGCATTGACCCCTCTGAGAGCATTGGAATCAGTGTTTTCCAGTCCACAATTGCAACCACTAGAATCAAGTCTGCTAAGGAATCACATAACTTTCTGCTGTCATTCTATGTTGGAGGAGGAGCCAATCCTGCATCAGTACTTTCTGGATTCGCGCCTGAAATCATTGAAACTGCTTTTAATGTATCAGGGGCAGAGCTGAAGAAAATGTTCACAAGGCAACATGAAGGCCCAATTGTGCATTTGGATAATTCACTTTCTACAAGCATATGGACAAAATTCCTTCAAATGAATGGGGATGACAAACTGCAACACCTCAAGAAAATGGTCATTGAAGACCAACAAGAGCCTGATGAGGATGATGTTGATGCTGATAATGATGATGATGAAGAAGAAGAACAAGTAACAAGATTGTCATGGAGGAAGCTCTTGGAATCTGTGTTCAGGAATAACAACAACAAAGAGATAAGGGAAAAGGTTGTCCATGAATCCCATCACTCTTGCAACCTCTATGATAGAAACCCAGATTTCAAAAATGATTATGGTTGGAGCACTGCTCTAGATGGCTCTGATTATCCTCCACTAAAAAAGTCAGGCATTGGAATTTATCATGTCAATCTCTCACCGGGATCGATGATGACACCCCATGTGAATCCAAGGGCAACAGAATATGGCATAGTGTTAAAGGGTTCAGGTAGAATCCAAATAATATTTCCAAATGGAAGCAGTGCAATGGATACTCATATAAAAGAAGGGGATGTGTTTTTTGTGCCAAGATACTTCCCATTCTGTCAAATAGCATCAAAGAATGGACCATTAGAGTTCTTTGGGTTCACTACCTCAGCTAGGAAGAACAAGCCACAGTTTCTAGTTGGTGCTACATCACTGATGAGAACCATGATGGGGCCTGAACTTGCAGCTGCATTTGGAGTTAGTGAAGACACAATGAAACGCATGGTTGATGCACAACATGAGACTGTGATACTACCTACTCCATGGGCTCAAGCACATGCACAAGCACATACAAACCAGAAGAAGAAGAAGAATATACAAGTTACAGTTCCAAAGCTTATTAGGAATGAGGTGATTATGGATTTTTGA 1551 0.4088 MANRTTLLVLLVLVLCHGVGVTMGLWMKEVEQDKKHWHPMSDKLFLMQNSKHIVKTDAGEMRVLESYGGRIMDRRLNIGFITMEPRSLFIPQYLDSTFIIFLRAGEAKVGFVCKSKLVEKHLKMGDVYRIPAGSAFYLVNTMDDQRLHIICSIDPSESIGISVFQSTIATTRIKSAKESHNFLLSFYVGGGANPASVLSGFAPEIIETAFNVSGAELKKMFTRQHEGPIVHLDNSLSTSIWTKFLQMNGDDKLQHLKKMVIEDQQEPDEDDVDADNDDDEEEEQVTRLSWRKLLESVFRNNNNKEIREKVVHESHHSCNLYDRNPDFKNDYGWSTALDGSDYPPLKKSGIGIYHVNLSPGSMMTPHVNPRATEYGIVLKGSGRIQIIFPNGSSAMDTHIKEGDVFFVPRYFPFCQIASKNGPLEFFGFTTSARKNKPQFLVGATSLMRTMMGPELAAAFGVSEDTMKRMVDAQHETVILPTPWAQAHAQAHTNQKKKKNIQVTVPKLIRNEVIMDF 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1241 516 Gene3D Jelly Rolls 310 482 IPR014710 -
Lal10g1241 516 Pfam Cupin 319 465 IPR006045 -
Lal10g1241 516 Pfam Cupin 51 151 IPR006045 -
Lal10g1241 516 PANTHER OS03G0336100 PROTEIN-RELATED 4 488 - -
Lal10g1241 516 PANTHER OS03G0336100 PROTEIN 4 488 - -
Lal10g1241 516 CDD cupin_7S_vicilin-like_C 325 475 - -
Lal10g1241 516 SMART Cupin_1_3 318 467 IPR006045 -
Lal10g1241 516 SMART Cupin_1_3 45 218 IPR006045 -
Lal10g1241 516 MobiDBLite consensus disorder prediction 265 283 - -
Lal10g1241 516 Gene3D Jelly Rolls 38 240 IPR014710 -
Lal10g1241 516 MobiDBLite consensus disorder prediction 262 284 - -
Lal10g1241 516 CDD cupin_7S_vicilin-like_N 53 232 - -
Lal10g1241 516 SUPERFAMILY RmlC-like cupins 47 476 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1241 Lal-Chr10 18698756 18701068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1241 319 479 Miscellaneous Gene Families AT2G18540 38.690 3.11e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1241 - - lang:109342739 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1241 10 18698756 18701068 Lal10g1241 10 18698756 18701068 ECH
Lal10g1241 10 18698756 18701068 Lal1g0369 1 2227597 2229980 PCT
Lal1g0369 1 2227597 2229980 Lal10g1241 10 18698756 18701068 PCT