Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1345 ATGGACTGGTTTTCTTGGTTATCTAGAACAAATCTTGACCCTTCCCTTATTTATGATTATGGCCTCACCTTTGCACGAAATGAGCTTCAATTAGAAGATGCTATCTACTTCAACAATGAGTTTCTACTAAGCATGGGAATCTCAGTTGCAAAACACAGGTTAGAAATTCTCAAACTTGTCAAAAAGGAAGAAGCAGAATCAGCTAAACAACCCAATAAGAAACTTTCTAAAGTCATCAAAAAGTACCTAAGGAAGTGTATGAGTAAGTTTGTTTTTCGTGAAGATCATAATAATATAAAGGTCATAAAGGATATTCCACTGCCACCACTATTACCACAAGTAGCAGAACCAAATTGGCACCAAGGGAAATGGAAAGAGACACAAGTGATTAAACACCAACATCATGGGACTAAAGTGCTGAAAGATGAGAAGCTTCCACGTGTGCCCATGTACAGAAGCAGAACTATAGCACTTTCAGGACCTTTGGATCATAGTAGAATGCATGAGAAAATGGTGAGCACAAAAGCCTTGAGGTTATCTGGGCCTCTTGATGGAAAGATGAATGAGAGAATGAAGATTTACACAAATAGAAGCCCTTTAATTTCTAGGCATGTGGATGGAAGGTTCACTGCTACAACAAAGAGTCCTAGATTTTCAGGGCCTCTTCAAGTTGAGAATAGAAGTCCAAGAGTAACAAGGACTTCTGATTCTACAAGGGCTGATATTGAAAACCCAATGGGTAGTTATAGTCCTTATAATAAGCCTAAAGCTGATTTTGATTCTAATGATGATCTTGATCACACACTATGGCCTACACTGTTTCAAGATCTAAAACCAACTTGA 843 0.3808 MDWFSWLSRTNLDPSLIYDYGLTFARNELQLEDAIYFNNEFLLSMGISVAKHRLEILKLVKKEEAESAKQPNKKLSKVIKKYLRKCMSKFVFREDHNNIKVIKDIPLPPLLPQVAEPNWHQGKWKETQVIKHQHHGTKVLKDEKLPRVPMYRSRTIALSGPLDHSRMHEKMVSTKALRLSGPLDGKMNERMKIYTNRSPLISRHVDGRFTATTKSPRFSGPLQVENRSPRVTRTSDSTRADIENPMGSYSPYNKPKADFDSNDDLDHTLWPTLFQDLKPT 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1345 280 CDD SAM_superfamily 2 62 - -
Lal19g1345 280 PANTHER OSJNBA0033G05.11 PROTEIN 1 280 - -
Lal19g1345 280 MobiDBLite consensus disorder prediction 212 231 - -
Lal19g1345 280 MobiDBLite consensus disorder prediction 212 260 - -
Lal19g1345 280 PANTHER STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN 1 280 - -
Lal19g1345 280 SUPERFAMILY SAM/Pointed domain 5 62 IPR013761 -
Lal19g1345 280 Gene3D - 1 68 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1345 Lal-Chr19 16322907 16323749 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1345 - - lang:109346058 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1345 19 16322907 16323749 Lal19g1345 19 16322907 16323749 ECH
Lal7g1215 7 17803971 17804780 Lal19g1345 19 16322907 16323749 LSH
Lal19g1345 19 16322907 16323749 Lal17g1388 17 15312496 15313245 PCT
Lal17g1388 17 15312496 15313245 Lal19g1345 19 16322907 16323749 PCT