Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal17g1388 | ATGGACTGGTTCTCATGGCTATCCAGGACTACTCTAGAACCATCCCTTGTCTATGAATATGGCTTAGCATTTTCTAGAAATGAACTTCAGTTAGAAGATGCTGTATACTTCAACCATGAGTTTCTTCAAAGCATGGGAATTTCAATTGCCAAACACAGGCTAGAAATTCTCAAACTTGCTACAAAAGAAGATGGAACAATAATGTTATTACGTACCAAAAAACTTTCTCTTGTCCTTAAAAAATGTCTAAGGAAGTGCATGAGCATGATTTTTCACGACGACGACAACGAAGATGTGAAGGAGTATATGCCACGAGAGGCAAATTGGTATCAAGGGAAATGGAGAAGGGCATTGGTGAAAGGAGAAAAAGGAATGCAAAGAAGTAGAAGTATAACATTATCAGGACCGTTAGACGGAAGAATGCATGAGAGAATTGTCGGCAACAAATTGTTGAAATTGTCTGGGCCTATTGATGGAAAGATGAATGAAAGAATGATGTACATAAATAGGAGTCCAAGACCAATTGATGGAAGGTTTATGGGCACACCAAAGCATCCAACATTGGCTTCTGGTCCAATTGATACAAGAACAATGGTTCATAGTAGAAGTCCAAGGCTAATGAGGTCTTCAGATGAAAGGGGTGAGAGCCCAATGGGTTATAGTAATAGCCCTTACAATAATTACTCCAAAGATTATGATGATGAATATGCTATGTGGCCTACACTGTTTGAAGATCTCAAACCTACTTAA | 750 | 0.3867 | MDWFSWLSRTTLEPSLVYEYGLAFSRNELQLEDAVYFNHEFLQSMGISIAKHRLEILKLATKEDGTIMLLRTKKLSLVLKKCLRKCMSMIFHDDDNEDVKEYMPREANWYQGKWRRALVKGEKGMQRSRSITLSGPLDGRMHERIVGNKLLKLSGPIDGKMNERMMYINRSPRPIDGRFMGTPKHPTLASGPIDTRTMVHSRSPRLMRSSDERGESPMGYSNSPYNNYSKDYDDEYAMWPTLFEDLKPT | 249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal17g1388 | 249 | MobiDBLite | consensus disorder prediction | 201 | 227 | - | - | |
| Lal17g1388 | 249 | CDD | SAM_superfamily | 2 | 62 | - | - | |
| Lal17g1388 | 249 | PANTHER | STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN | 1 | 249 | - | - | |
| Lal17g1388 | 249 | SUPERFAMILY | SAM/Pointed domain | 6 | 60 | IPR013761 | - | |
| Lal17g1388 | 249 | Gene3D | - | 1 | 67 | IPR013761 | - | |
| Lal17g1388 | 249 | PANTHER | OSJNBA0033G05.11 PROTEIN | 1 | 249 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal17g1388 | Lal-Chr17 | 15312496 | 15313245 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal17g1388 | - | - | lang:109328139 | 480.33 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal17g1388 | 17 | 15312496 | 15313245 | Lal17g1388 | 17 | 15312496 | 15313245 | ECH | |
| Lal7g1215 | 7 | 17803971 | 17804780 | Lal17g1388 | 17 | 15312496 | 15313245 | PCT | |
| Lal19g1345 | 19 | 16322907 | 16323749 | Lal17g1388 | 17 | 15312496 | 15313245 | PCT | |
| Lal17g1388 | 17 | 15312496 | 15313245 | Lal7g1215 | 7 | 17803971 | 17804780 | PCT | |
| Lal17g1388 | 17 | 15312496 | 15313245 | Lal19g1345 | 19 | 16322907 | 16323749 | PCT |