Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1191 ATGGCTGAGGAATTTTCGAGAGCGGTTGATGACGGTCTAAGGCTATCTAAACGAATAAACTACGGGAAAGACAGGGCGGTGGCGCCGCCGAAGTTGCCGGCGCCGATGATGAAGTCGCCGGATGCCTTACTTCCAACGTCGCCGATGGTTTACGCGGTGATTGAGGATCCAGGAATTGTGGATAATCCAGATATTCCAAGCTACCAACCGCACGTGTACGGAAGGTGTGATCCTCCGGCGTTGATTCCGATTGAAATGAAGGGAATTGAGATGGAAATTGAATGTTATTTGGACACAGCGTTTATCACTGTGAATGGCTCTTGGAGGGTTCATTGCATTATGGCAAGCCGCGCTTGTGATTGCCGTCTTGCTATTCCCATATCCAAACAGGGTTCAATTCTAGGTGTTGAGATTACTGCTCCAACCAAATCATATTCTACTCAACTGGTTCTTATGGATGACAATAATGAGAACCAAAGTGGCATCACAGCTCAAAATGGTGGCTTCCTCAAGTCCAATATTCTCACTTTAATTATACCAAAGATTGACGGGGGTTCAATTTTATCAATTAAAATGCGTTGGTCTCAGAAAATAGTATACCGTGATGGTCAGTTCTCTTTGAATGTGCCATTTACCTTCCCTGATTTTGTCAACCCGGCAGCGAAGACAATATCTAAACGAGAAAAGATACAAATAAATGTGAATGCTATTGCTGGGAGTGAGCTTCTGTGCAAGAAAATGAGCCACCCCCTAAAGGAAGTGAGGCGTCATGCTGGGAGTATGGGTTTCTTATACGATTCTGAAGTTCTCTCATGGTCAAACTCTGATTTTAGCTTTTCATATGCTGTTCCCTCAAGTCATATAAATGGTGTTGTTCTTTTGGAATCTGCATCTGTGCATGATAGTGATCAAAGAGAGATGTTCTACATTTGCCTTTCCCCTGGAGATATTCAGAGTAAGGTATTCAAAAAGGACATAATTTTCATTATTGACATCAGTGGAAGCATGCGGGGAAAGCTAATTGATGACACAAAGAATACACTATCGGAGGCTCTCTCTAAGCTTAATCCTCATGATTCATTTAATATTATTGCCTTCAATGGAGAGAGTTATATATTTTCAAAATCAATGGAGTTGGCTTCCAAGGATGCTGTTGAAAGGGCAAATGAGTGGATTAAGGCTAACTTTGTTGCTGCGGGTGCTACGAACATTTCACATGCCTTAAACAAGGCGATAGAAATTCTATCCAGAGCTAGAAGTTCAGTTCCAATAATTTTCTTAGTGACAGATGGAACTGTTGAAGATGAAAAACAAATTTGTACTTTGGTAAAGAATCATATGGTCAATGGAGAGTCAATATGCCCAAGAATTTATACTTTTGGAATAGGTTCATTCTGCAATCATTACTTCTTGCGGATGCTTGCAATGATTGGTAGGGGACAATATGATGCAGCATTGGATGTAGATTTGGTTAAGCCTCAAATGCTGTCGTTGTTCGACAAAGCTTCATCTCTCGTTCTTGCAAATATAAAAGTGGACATATTTGATGAGCTTGATGAATTTGAGGTATACCCTTCCGATGTTCCAGATCTTTCATCAGAGGGTCCACTAGTTTTATCTGGCCGATACAAGGGAAGTTTTCCCGAGAGTCTTAAAGTTAAAGGTGTCTTGCCTGATTTCAGTAATTTTGCAATAGATATGAAGATACAAAAGGCTAAGGACATATCATTACAAAGGGTTTCTGCAAGAGATCAAATAGAGTATCTAACTGCTCAAGCATGGCTTTCAGAAAATAAACAATTACAACAGAAGGTTGCAAAATTGAGTCTGCAGACTGGCTTCATTTCCGAGTATACACAAATGATAATACTTGAGGATGATCATCTAAAGAAAGTCAAGGATTCAGCTGGAACTAAAGTGCCAAAAGATAACCATGGTCGGCATGAGGCAAACATCCAAGGCCAGAAAATGATTATACTCGCACACTTAGGCATTGGCTTTGGCAACTTAACCGCAACCGCTGAAAACATTCCTCCAGGATATGAAACCAAATTGCCGGAAGTGGCTGCAATATTTAAAGCTGCCTCAAATTGTTGCAGCACATTGTGTGGTTACTGTTGTTGCCCATGCTGCATCCAGTGCTGTTCTATGATGAACAACCAATGTGCAACTACACTCACTCAGCTTTTCATTGCTATAGGATGCTTCGGTTGCCTCACATGTTGTTCAGAGATATGCTGTTCTCGAAATGATGGCTGA 2259 0.4112 MAEEFSRAVDDGLRLSKRINYGKDRAVAPPKLPAPMMKSPDALLPTSPMVYAVIEDPGIVDNPDIPSYQPHVYGRCDPPALIPIEMKGIEMEIECYLDTAFITVNGSWRVHCIMASRACDCRLAIPISKQGSILGVEITAPTKSYSTQLVLMDDNNENQSGITAQNGGFLKSNILTLIIPKIDGGSILSIKMRWSQKIVYRDGQFSLNVPFTFPDFVNPAAKTISKREKIQINVNAIAGSELLCKKMSHPLKEVRRHAGSMGFLYDSEVLSWSNSDFSFSYAVPSSHINGVVLLESASVHDSDQREMFYICLSPGDIQSKVFKKDIIFIIDISGSMRGKLIDDTKNTLSEALSKLNPHDSFNIIAFNGESYIFSKSMELASKDAVERANEWIKANFVAAGATNISHALNKAIEILSRARSSVPIIFLVTDGTVEDEKQICTLVKNHMVNGESICPRIYTFGIGSFCNHYFLRMLAMIGRGQYDAALDVDLVKPQMLSLFDKASSLVLANIKVDIFDELDEFEVYPSDVPDLSSEGPLVLSGRYKGSFPESLKVKGVLPDFSNFAIDMKIQKAKDISLQRVSARDQIEYLTAQAWLSENKQLQQKVAKLSLQTGFISEYTQMIILEDDHLKKVKDSAGTKVPKDNHGRHEANIQGQKMIILAHLGIGFGNLTATAENIPPGYETKLPEVAAIFKAASNCCSTLCGYCCCPCCIQCCSMMNNQCATTLTQLFIAIGCFGCLTCCSEICCSRNDG 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1191 752 SMART VWA_4 323 499 IPR002035 -
Lal19g1191 752 Pfam von Willebrand factor type A domain 324 482 IPR002035 -
Lal19g1191 752 Gene3D von Willebrand factor, type A domain 324 500 IPR036465 -
Lal19g1191 752 SUPERFAMILY vWA-like 324 486 IPR036465 -
Lal19g1191 752 Coils Coil 591 611 - -
Lal19g1191 752 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 751 - -
Lal19g1191 752 ProSiteProfiles VWFA domain profile. 325 518 IPR002035 -
Lal19g1191 752 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1191 Lal-Chr19 15330503 15336094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1191 - - gmx:100777542 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1191 19 15330503 15336094 Lal19g1191 19 15330503 15336094 ECH
Lal19g1191 19 15330503 15336094 Lal17g1488 17 16308751 16315495 PCT
Lal17g1488 17 16308751 16315495 Lal19g1191 19 15330503 15336094 PCT