Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1488 ATGGCGGAGGAGTTTTCAAAAGCGGTTGAGGAAGGCCTCCGTCTCTCTAAACGAATCTACTTCGGCCGTGACAGAGCGGTGTCTCCGCCTAAACCACCAGCTTCTATGCTCAAATCCTCCACCGCTTTTCTCCCTACTGCTCCCATGATTTACGCCGTCATTCACAACCCTGGCATCGTCGACAACCCTGACGTCCCTAGCTACCAGCCTCATGTTCACGGCAGGTGTGATCCTCCGGCACTCATTCCTCTCCACATGTCCGCCATTCATCTCAATGCTCATTGTTATTTCGACACGGCGTTTGTAACCGTTTCCGCCACGTGGAGGTTGCATTGCGTCACCGGTTGCCGGAGCTGTGACTGCCGTATCGCCATTCCTATGGGCGGCAATCAGGGTTCAATTCAAGGTGTTGAGGTTAGTGTCCATAGGAAATCTTATTCTACTCAACTGGTTGATATGGAAGACACCAGTGATAAAGAGAGTGCGATCCGAGCTCAAAATGGAGGCTTTCTCAAGCCTAATATCTTCACTTTGAATATACCTCAGATTGATGGGGGTTCCAATTTATCAGTCAAGATTACTTGGTCCCAAAAAGTACTATACTATGATGATACGTTCTCATTTAATGTGCCATTTACCTTTCCTGATTTTGTCAACCCCGCCGGGAAGAGAATGTTGAGAAAAGAGAAGATACAAATAAATGTGAATGCTGATGCTGGAAGTGAGCTTCTATGCAAGGCAATAAGTCATCCCCTAAAGGAAGTGAAGCGCAGTGCTGGGAGTATGGGTTTCTCAATTGATTCTGAAGTTATATCATGGTCAAAAGTTGATTTTAATTTTTCATATGCTGTTTCTTCAAGTCATATCCATGGTGGTGTTCTTTTGAAATCTCCATCCGTGGATGATTTTGATCAAAGAGAGATGTTCTGCATGTACCTTTCTCCTGGAAATCTTCAGAGTAGGAAGGTATTCAGAAAGGACATCATATTCGTTATTGACATCAGTGGTAGTATGCGGGGAAAGTTAATTGACGACACAAAGAATGCACTATCGACTGCTCTCAACAGGCTTGATCTTGATGATTCATTCAGTATTATAGCATTTAATGGAGAGAGTTATTTATTTTCGACATCAATGGAATTAGCTTCAAAGGATACTGTTCAAAGGGCCATCGAGTGGATTAACATGAACTTTGTTGCAGGGGGTGATACAAATATTTTGCATCCCTTAAAAACGGCAATGGAGATGCTATCCAGCGCTCAAAGTTCTATTCCAATCATTTTCCTAGTAACAGATGGAAGTGTTGAAGATGAGAGACAAATTTGTGATATGGTAAAGAATCACGTGACCAATGCAGAATTAATACCCCCACGAATTTACACTTTTGGAATAGATTTGGTTGAGCCTCAAATGCTGAGATTGTTTGACAAAGCTTCATCTCTTGTTCTTGCAAATATCACAATGGACATATTTGATGATCTGGATGAAGTTGAGGTGTACCCCTCCCGTATTGTAGAGCTCTCGTCAGATGTTCCATTGACTTTATCTGGAAGATATAAGGGGCATTTTCCGGAAATTCTTAAAGTTCAAGGTGTCTTGTCTGATTTCAGTAGTTTTGTAATGGATATGAAGATACAAGAAGCTAAGGACATACCTGTAGAAAGGATTTGTGCAAGAGATCAGATAGAGTATCTTACAGCTCAAGCATGGCTTTTAAAAAGTAAAGAACTAGAACAGAAGGTTGCAAAACTGAGTCTGCAAAATGGCTTTATGTCTGAGTATACGAGTATGGCAATTCTTGAGGATGATCAGCTAAAAAAGGAAATGTCAAAGAAGACGAAACCTCGAAAAGGAGAAAATGCCGAAGGCCAGAGAATGATTATGCTCCCAAACTTAGGCCTAGGCTTTGGCAACTTGATTGCAACCGCTGAAAACACGCCACCAGGATGGGAAGAAACAAGAGGGCCTGATGGGGCTGAAATGTTTGTTAAGGCGGCCACGAATTGTTGCGGCTCCATATGCCATTACTGCTGTTGCATGTGCTGCATCCAGTGCTGTACCCGGATGAACAACCAGTGTGCAACTGCATTGACTCAGCTTTGTGTTGGCATAGGATGCTTAGGTTGCCTCAGCTGTTGTTCAGATATGTGCTGTGCAGAAAGTGAAAATTGA 2172 0.4282 MAEEFSKAVEEGLRLSKRIYFGRDRAVSPPKPPASMLKSSTAFLPTAPMIYAVIHNPGIVDNPDVPSYQPHVHGRCDPPALIPLHMSAIHLNAHCYFDTAFVTVSATWRLHCVTGCRSCDCRIAIPMGGNQGSIQGVEVSVHRKSYSTQLVDMEDTSDKESAIRAQNGGFLKPNIFTLNIPQIDGGSNLSVKITWSQKVLYYDDTFSFNVPFTFPDFVNPAGKRMLRKEKIQINVNADAGSELLCKAISHPLKEVKRSAGSMGFSIDSEVISWSKVDFNFSYAVSSSHIHGGVLLKSPSVDDFDQREMFCMYLSPGNLQSRKVFRKDIIFVIDISGSMRGKLIDDTKNALSTALNRLDLDDSFSIIAFNGESYLFSTSMELASKDTVQRAIEWINMNFVAGGDTNILHPLKTAMEMLSSAQSSIPIIFLVTDGSVEDERQICDMVKNHVTNAELIPPRIYTFGIDLVEPQMLRLFDKASSLVLANITMDIFDDLDEVEVYPSRIVELSSDVPLTLSGRYKGHFPEILKVQGVLSDFSSFVMDMKIQEAKDIPVERICARDQIEYLTAQAWLLKSKELEQKVAKLSLQNGFMSEYTSMAILEDDQLKKEMSKKTKPRKGENAEGQRMIMLPNLGLGFGNLIATAENTPPGWEETRGPDGAEMFVKAATNCCGSICHYCCCMCCIQCCTRMNNQCATALTQLCVGIGCLGCLSCCSDMCCAESEN 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1488 723 ProSiteProfiles VWFA domain profile. 327 504 IPR002035 -
Lal17g1488 723 Pfam von Willebrand factor type A domain 326 474 IPR002035 -
Lal17g1488 723 SMART VWA_4 325 495 IPR002035 -
Lal17g1488 723 Gene3D von Willebrand factor, type A domain 326 488 IPR036465 -
Lal17g1488 723 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 464 - -
Lal17g1488 723 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 464 722 - -
Lal17g1488 723 Coils Coil 567 587 - -
Lal17g1488 723 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 464 - -
Lal17g1488 723 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 464 722 - -
Lal17g1488 723 SUPERFAMILY vWA-like 326 476 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1488 Lal-Chr17 16308751 16315495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1488 - - gmx:100820133 1043.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1488 17 16308751 16315495 Lal17g1488 17 16308751 16315495 ECH
Lal19g1191 19 15330503 15336094 Lal17g1488 17 16308751 16315495 PCT
Lal17g1488 17 16308751 16315495 Lal19g1191 19 15330503 15336094 PCT