Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1139 ATGACAAACTTGAAGCTCTTATCTCTTATCTTATTCACTCTTGTAATATCCACTAATGCAAATCTGATAGAACAAACTTGCACACAGACACCAAATCATGATCTATGTGTTCATTACCTCAAAGCTGATCCTCATAGCTCTGATGCTGATGTCACAGGACTAGCCCTAATCATGGTGAATGTGATCAAAACCAAAGCAAACACTTCCTTAAACAAAATCCATCAACTTCTTGAAGGGAACCCTAAACCTGGTCAAAAAGAAGCATTGAATTCATGTAGTGGAAGATACAATGCAATTTTGGTAGCAGATGTACCACAAGCCATTGCAGCTCTAAAGAAAGGTGACCCAAAGTTTGCAGTGGATAGTGCTAATGATGCTGCCATTGAAGCTACCTCTTGTGAGAAAAGCTTCTCTGGGAAATCTCCACTTACCAATGATAACAATTCCATGAATGATATAGCAGCAGTTACAGCAGCTATTGTGAAAATACTGCTCTAG 498 0.3896 MTNLKLLSLILFTLVISTNANLIEQTCTQTPNHDLCVHYLKADPHSSDADVTGLALIMVNVIKTKANTSLNKIHQLLEGNPKPGQKEALNSCSGRYNAILVADVPQAIAALKKGDPKFAVDSANDAAIEATSCEKSFSGKSPLTNDNNSMNDIAAVTAAIVKILL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1139 165 CDD CIF_like 20 164 IPR034087 GO:0004857|GO:0043086
Lal19g1139 165 SMART PMEI_2 18 160 IPR006501 GO:0004857
Lal19g1139 165 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 165 - -
Lal19g1139 165 Gene3D Invertase/pectin methylesterase inhibitor family protein 18 165 IPR035513 -
Lal19g1139 165 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 20 164 IPR035513 -
Lal19g1139 165 Pfam Plant invertase/pectin methylesterase inhibitor 21 160 IPR006501 GO:0004857
Lal19g1139 165 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 14 165 - -
Lal19g1139 165 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 164 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1139 Lal-Chr19 14927706 14928203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1139 - - gmx:100306719 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1139 19 14927706 14928203 Lal19g1139 19 14927706 14928203 ECH
Lal14g1591 14 16433582 16434799 Lal19g1139 19 14927706 14928203 LSH
Lal7g0988 7 16147151 16147687 Lal19g1139 19 14927706 14928203 LSH