Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1591 ATGTTAGTATTTAATACCCTCTTGATCTTCAAGGCTTCTAATGCCATCCTTCTCATTCAAACAGCCATGACAAATTTGAAGCCCATAGCTCTTATCTTATGCACTCTTTTTATAGCTACAAATGCCAATCTGATAGAGGAAACTTGCATGCAGACACCAAATCATGATCTTTGTGTTCAGTACCTCCAAGCTGACCCTCATAGCTCTGATGCTGATGTCAGTGGCCTAGCACTAATCATGGTGAATGTGATCAAAACCAAAGCAAAAAATGCCTTAGTCAAAATCCACCAACTACTTCAAGGTAGCCCTGAACCTGGTCAAAAGGAAGCATTGAATACATGTGGTGGCCAATACAATGCAATTTTAGTAGCTGATGTACCACAAGCCATTGCATCTCTACAGAAAGGGGATCCCAAGTTTGCTGTAGATAGTGCTAATGATGCTGCCATTGAAGCCACCTCTTGTGAGAACAACTTCTCTGGGAAATCACCACTTACCAATGACAACAATTCCATGCATGATGTAGCAGCAGTAACTTCAGCTATTGTCCTAACTTAA 558 0.4104 MLVFNTLLIFKASNAILLIQTAMTNLKPIALILCTLFIATNANLIEETCMQTPNHDLCVQYLQADPHSSDADVSGLALIMVNVIKTKAKNALVKIHQLLQGSPEPGQKEALNTCGGQYNAILVADVPQAIASLQKGDPKFAVDSANDAAIEATSCENNFSGKSPLTNDNNSMHDVAAVTSAIVLT 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1591 185 TIGRFAM PME_inhib: pectinesterase inhibitor domain 31 183 IPR006501 GO:0004857
Lal14g1591 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 184 IPR035513 -
Lal14g1591 185 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 32 184 - -
Lal14g1591 185 Pfam Plant invertase/pectin methylesterase inhibitor 43 182 IPR006501 GO:0004857
Lal14g1591 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 183 IPR035513 -
Lal14g1591 185 CDD CIF_like 42 183 IPR034087 GO:0004857|GO:0043086
Lal14g1591 185 PANTHER PECTINESTERASE INHIBITOR-LIKE 32 184 - -
Lal14g1591 185 SMART PMEI_2 40 182 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1591 Lal-Chr14 16433582 16434799 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1591 - - gmx:100306719 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1591 14 16433582 16434799 Lal14g1591 14 16433582 16434799 ECH
Lal14g1591 14 16433582 16434799 Lal7g0988 7 16147151 16147687 LSH
Lal14g1591 14 16433582 16434799 Lal19g1139 19 14927706 14928203 LSH