Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1051 ATGCAAGACTCAGTTGTGATTCCTGCTTGCTTTTCTTCAACAGATAAGTTAAGTGATGAACATGGGGCAGTGACACGTTTAGGTCAAAGTGTTTACATGTCAGTGTATAGAACACAGATTGCTGATCACTGCCGTTTGATCACAATCACATGGTGCAAAAACTTGTTGCTTCATGGTTTATCAATATCAGTGGAAGGCTCAGAAGGAGAGACACAATACACCTGCAAGGTTGAGCTAAAGCCATGGTACTTTTGGAGGAAACAAGGTTCTAAAAGGTTTGTAGTAGATGGCAAAGCTCTTGACATATTCTGGGACCTTAAAGGTGCAAAGTTTAATGGTGAAACTGAACCAAGCTCAGAGTACTATGTAGCAGTTGTTTGTGATGAAGAGGTTGTGCTGCTTCTTGGTGATCTAAAAAAAGAAGCTTACAGAAGAACTGGTTGTAGACCAGCACTTATTGATCCTATTTTGGTTTCAAAGAAAGAGCATATTTTTGGTAAGAAGAAGTTTTCAACTAGAGCTAAGTTTCATGAGAAAGGGAGTTGGCATGAGATCTCAATTGAATGCAAGATTAACAAATGGAATAATGGTGGTAATTTTCATCTTGCAAGTGGTGTGCAGCCAGAGATGGAGATAAAGATTGATGGGCACTTAGTGATTCATGTGAAGCACTTGCAATGGAAATTTAGAGGCAATGAGTCAATTCATCTCAGAAAAATGAGAGTTGAGGTATATTGGGATGTTCATGATTGGATCTTTAGTCCTGGTTTAAAACATGCTTTGTTCATTTTTAAGCCTAATTTATCATATGCACCATCTATGTCATCATCATCATCATTAACATCATCACCAGCTTCATTACTATCAACTCAAGCAACAAAGAATTGGTCTGAGTCAGTGGAGGGTTTTAGTATTAGTGGTTCATCAGAGTTTTGCTTGTTTCTCCATGCATGGAAAGTTGAATGA 966 0.382 MQDSVVIPACFSSTDKLSDEHGAVTRLGQSVYMSVYRTQIADHCRLITITWCKNLLLHGLSISVEGSEGETQYTCKVELKPWYFWRKQGSKRFVVDGKALDIFWDLKGAKFNGETEPSSEYYVAVVCDEEVVLLLGDLKKEAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGSWHEISIECKINKWNNGGNFHLASGVQPEMEIKIDGHLVIHVKHLQWKFRGNESIHLRKMRVEVYWDVHDWIFSPGLKHALFIFKPNLSYAPSMSSSSSLTSSPASLLSTQATKNWSESVEGFSISGSSEFCLFLHAWKVE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1051 321 Pfam Plant protein of unknown function (DUF868) 29 319 IPR008586 -
Lal19g1051 321 PANTHER EXPRESSED PROTEIN 1 321 IPR008586 -
Lal19g1051 321 PANTHER OS01G0909400 PROTEIN 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1051 Lal-Chr19 14291922 14292887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1051 8 321 EF-hand Containing Proteins AT5G28150 36.478 1.26e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1051 - - gmx:100779755 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1051 19 14291922 14292887 Lal19g1051 19 14291922 14292887 ECH
Lal14g1493 14 15867705 15868646 Lal19g1051 19 14291922 14292887 LSH
Lal19g1051 19 14291922 14292887 Lal17g0885 17 6792539 6793852 PCT
Lal19g1051 19 14291922 14292887 Lal4g0783 4 6643127 6644092 PCT
Lal17g0885 17 6792539 6793852 Lal19g1051 19 14291922 14292887 PCT
Lal4g0783 4 6643127 6644092 Lal19g1051 19 14291922 14292887 PCT