Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0885 ATGAAAATGATTATTGTGTACACCATCAAGAAGAAGAAGAAGAAGAAAATGCAAGATTCAATTGGAATCCCAGCTTGTTTTTCTTCTTTAGATAAGGGCAATGATGATCATGTTCTTGGTGCTGTGACCCGTTCAGGTCAAAGTGTTTACATGTCTGTCTATAGAACAAAGATTGCTGATCATTGCCGTTTGATCACCATCACTTGGTGCAAAAACTTATTGCTTCATGGTCTATCAATATCAGTTGAAGGCCCAGAAGGAGAAACTCAATATAGCTGCAAGATTGAGCTAAAACCATGGTACTTTTGGAGGAAACAAGGTTCTAAACGCTTCATAGTAGATGGTAAATATGTTGATGTTTTTTGGGATCTCAAAGCTGCAAAATTCAATGGTGAAATTGAACCAACCTCGGAGTATTATGTAGCAGTGGTTTGTGATCAAGAGATTGTGCTGCTTCTTGGTGACCTAAGGAAAGAAGCACATAAAAGAACTGGATGCAAGAAATCTCTTATTGACCCTATTTTGGTTTCAAGAAAAGAGCACATATTTGGGAAGAGAAAGTTCTCTACTAAAGCTAAGTTTCATGAGAAAGGAAGGTTCCATGAGATCTCAATAGAGTGCAAGAACAAAAGCAGTGGTGACTTATCATCTGTTACTGAGATTCAGCCAGAACTTGAGATAAGATTTGATGGGCACTTAGTGATTCATGTGAAGCATTTACAATGGAAATTTAGAGGCAATGAATCAGTTCATCTTAACAAGATGAGAGTGGAAGTGTTTTGGGATGTTCATGATTGGCTCTTTAGTCCAGGTTTAAAGCATGCATTATTTATTTTAAAGCCGATTTTACCATCTTCTTCTACATCATCATTATCATCATTATTATCATCGTCATCATCATTATTATCGCGTTCATCATCATCTACACCATTATCATCTCAGACAGAAAGTTCTGGGTCAGTGGAAGGGTTGAGTACAATTAGTGGGTCATCATCATCATCAGAGTTTTCCTTGTTTCTCTATGCCTGGAAGATTGAATGA 1041 0.3718 MKMIIVYTIKKKKKKKMQDSIGIPACFSSLDKGNDDHVLGAVTRSGQSVYMSVYRTKIADHCRLITITWCKNLLLHGLSISVEGPEGETQYSCKIELKPWYFWRKQGSKRFIVDGKYVDVFWDLKAAKFNGEIEPTSEYYVAVVCDQEIVLLLGDLRKEAHKRTGCKKSLIDPILVSRKEHIFGKRKFSTKAKFHEKGRFHEISIECKNKSSGDLSSVTEIQPELEIRFDGHLVIHVKHLQWKFRGNESVHLNKMRVEVFWDVHDWLFSPGLKHALFILKPILPSSSTSSLSSLLSSSSSLLSRSSSSTPLSSQTESSGSVEGLSTISGSSSSSEFSLFLYAWKIE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0885 346 PANTHER OS01G0909400 PROTEIN 17 346 - -
Lal17g0885 346 Pfam Plant protein of unknown function (DUF868) 45 344 IPR008586 -
Lal17g0885 346 MobiDBLite consensus disorder prediction 303 334 - -
Lal17g0885 346 PANTHER EXPRESSED PROTEIN 17 346 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0885 Lal-Chr17 6792539 6793852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0885 23 346 EF-hand Containing Proteins AT5G28150 37.730 4.46e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0885 - - gmx:100779755 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0885 17 6792539 6793852 Lal17g0885 17 6792539 6793852 ECH
Lal17g0885 17 6792539 6793852 Lal4g0783 4 6643127 6644092 LSH
Lal14g1493 14 15867705 15868646 Lal17g0885 17 6792539 6793852 PCT
Lal19g1051 19 14291922 14292887 Lal17g0885 17 6792539 6793852 PCT
Lal17g0885 17 6792539 6793852 Lal14g1493 14 15867705 15868646 PCT
Lal17g0885 17 6792539 6793852 Lal19g1051 19 14291922 14292887 PCT