Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0004 ATGACTACCAGTCCTCTAGCTAGAGATAATGATTCTGATCATGATGTGGAGCTTGTTTCTGGGAATGTGCAACTTATTACCACAAAAGAATCTTGGGACCAAAAGTTGGAACAAGCAAGGCATGATGGCAAAATTGTGATTGCAAATTTCAGTGCAACATGGTGTGATCCTTGTAAAATGATCGCACCATGTTACTGCGAGTTATCAAAGAAACACCCATCCATTTTGTTCTTATTAGTTGATGTGGATGAACTGGCTGATTTTAGCAGTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTAAGAGATGGAAAAGAGTTTGACAAACTTGTAGGAGCCAACAAGCCAGAGCTGGAAAAGAAGATTGATGCAGTTACTAAATCACTTCCCTAG 399 0.3985 MTTSPLARDNDSDHDVELVSGNVQLITTKESWDQKLEQARHDGKIVIANFSATWCDPCKMIAPCYCELSKKHPSILFLLVDVDELADFSSSWDIKATPTFFFLRDGKEFDKLVGANKPELEKKIDAVTKSLP 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0004 132 CDD TRX_family 30 125 - -
Lal19g0004 132 SUPERFAMILY Thioredoxin-like 18 129 IPR036249 -
Lal19g0004 132 Gene3D Glutaredoxin 3 131 - -
Lal19g0004 132 Pfam Thioredoxin 26 125 IPR013766 -
Lal19g0004 132 PRINTS Thioredoxin family signature 46 54 - -
Lal19g0004 132 PRINTS Thioredoxin family signature 54 63 - -
Lal19g0004 132 PRINTS Thioredoxin family signature 93 104 - -
Lal19g0004 132 ProSiteProfiles Thioredoxin domain profile. 5 129 IPR013766 -
Lal19g0004 132 PANTHER THIOREDOXIN 7 130 - -
Lal19g0004 132 PANTHER THIOREDOXIN H9 7 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0004 Lal-Chr19 39123 41743 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0004 K03671 - gmx:100527258 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0066 14 820332 825076 Lal19g0004 19 39123 41743 LSH