Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal14g0066 | ATGGGGAATTGTATGGCTAAGCCTCTAGCTAAAGATAATGATTCTGATCACGATGTGGAGTTTGTTTCTGGGAATGTGCAACTTATTACTACAAAAGAAGCTTGGGAGCAAAAGTTGGAACAAGCAAGGCATGATGGCAAAATTGTGATTGCAAATTTCACTGCAAGGTGGTGTGGTCCTTGTAAGATGATTGCACCATATTACTGCGAGTTATCAGAGAAACACCCAGCCATTTTGTTCTTATTAGTTGACGTGGATGAATTAGCGGATTTCAGCACTTCATGGGACATCAAAGCCACACCAACTTTTTTCTTTCTTAGAGATGGACAAGAGATTGACAAGCTTGTAGGTGCGAACAAGCCAGAGCTGGTAAAAAAGATTGGTGAAGTTACTAAAGCACCTACCTAG | 408 | 0.4093 | MGNCMAKPLAKDNDSDHDVEFVSGNVQLITTKEAWEQKLEQARHDGKIVIANFTARWCGPCKMIAPYYCELSEKHPAILFLLVDVDELADFSTSWDIKATPTFFFLRDGQEIDKLVGANKPELVKKIGEVTKAPT | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal14g0066 | 135 | Pfam | Thioredoxin | 29 | 127 | IPR013766 | - | |
| Lal14g0066 | 135 | PRINTS | Thioredoxin family signature | 49 | 57 | - | - | |
| Lal14g0066 | 135 | PRINTS | Thioredoxin family signature | 57 | 66 | - | - | |
| Lal14g0066 | 135 | PRINTS | Thioredoxin family signature | 96 | 107 | - | - | |
| Lal14g0066 | 135 | Coils | Coil | 25 | 45 | - | - | |
| Lal14g0066 | 135 | Gene3D | Glutaredoxin | 1 | 134 | - | - | |
| Lal14g0066 | 135 | CDD | TRX_family | 33 | 127 | - | - | |
| Lal14g0066 | 135 | ProSiteProfiles | Thioredoxin domain profile. | 8 | 132 | IPR013766 | - | |
| Lal14g0066 | 135 | SUPERFAMILY | Thioredoxin-like | 17 | 130 | IPR036249 | - | |
| Lal14g0066 | 135 | PANTHER | THIOREDOXIN | 6 | 132 | - | - | |
| Lal14g0066 | 135 | ProSitePatterns | Thioredoxin family active site. | 50 | 68 | IPR017937 | - | |
| Lal14g0066 | 135 | PANTHER | THIOREDOXIN H9 | 6 | 132 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal14g0066 | Lal-Chr14 | 820332 | 825076 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal14g0066 | K03671 | - | gmx:100527258 | 221.861 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal14g0066 | 14 | 820332 | 825076 | Lal14g0066 | 14 | 820332 | 825076 | ECH | |
| Lal14g0066 | 14 | 820332 | 825076 | Lal19g0004 | 19 | 39123 | 41743 | LSH |