Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1550 ATGGCAAAAAACAAGATCATTCACCAAACAACTAGGAAGATGTCACAACTCTGCAGGAAAGTGGTTGATGTTAATGTTCGTTGGGGTGTCCTACAAAGGGTATCTTTTGTTGGACACTTTTTTAGATTCATTTGGGGTAGGCTTGTGGTTTGTTCTGTTGGAAAACCTTCTAAGTACAGAAGATTGTCCTTCCGTGATTCTTCGCCTTTTCCGGTGGAAGAAAGGTTCATGCAAGAACACAACACGGTCATGGATAGTGATTATGACACAGATTCAGATTTGGTGAACTTGAAGATTAGTTTATTGGGTGATTGTGATATTGGAAAAACTACTTTTGTGTCCTTTTGTAAGATAAAGTATGTAGGGAATGAACAAGAAAAGAAGAGTCTGCAAATGGAAGGGCTAAATTTAATGGACAAAACATTGTTTGTTGAAGGAGCTCGAATTTCATGTTGTATATGGGATGTTGCAGGTGACAAAAGGTCCTTGGATCAAATTCCCATGGCATGTAAAGATGCACTTGCAGTTTTGATTATGTTTGATCTCACAAGCCGTTCTACACTAAATAATGTTGTTGGATGGTATAGTGAAGCAAGAAAGTGGAATAAGACTGCAATTCCCATTCTAATAGGCACCAAATTTGATGATTTTGTTAGGCTCCCCCCAGATTTGCAATGGACAATTGTAACACAGGCAAGGGCATATGCAAGGGCAATGAATGCAACCCTTTTCTTTTCAAGTGCAACACACAATATAAATGTGAACAAAATTTTCAAGTTTATAATGGCCAAGCTCTTTAACTTGCCATGGACGGTAGAAAGAAATTTAAGAGTTGGAGAGCCCATAATTGACTTCTGA 858 0.3823 MAKNKIIHQTTRKMSQLCRKVVDVNVRWGVLQRVSFVGHFFRFIWGRLVVCSVGKPSKYRRLSFRDSSPFPVEERFMQEHNTVMDSDYDTDSDLVNLKISLLGDCDIGKTTFVSFCKIKYVGNEQEKKSLQMEGLNLMDKTLFVEGARISCCIWDVAGDKRSLDQIPMACKDALAVLIMFDLTSRSTLNNVVGWYSEARKWNKTAIPILIGTKFDDFVRLPPDLQWTIVTQARAYARAMNATLFFSSATHNINVNKIFKFIMAKLFNLPWTVERNLRVGEPIIDF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1550 285 SMART rho_sub_3 99 267 IPR001806 GO:0003924|GO:0005525
Lal18g1550 285 PRINTS Transforming protein P21 ras signature 97 118 - -
Lal18g1550 285 PRINTS Transforming protein P21 ras signature 142 164 - -
Lal18g1550 285 PRINTS Transforming protein P21 ras signature 203 216 - -
Lal18g1550 285 PRINTS Transforming protein P21 ras signature 243 265 - -
Lal18g1550 285 ProSiteProfiles small GTPase Rab1 family profile. 87 285 - -
Lal18g1550 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 278 IPR027417 -
Lal18g1550 285 PANTHER - 73 284 - -
Lal18g1550 285 Pfam Ras family 98 265 IPR001806 GO:0003924|GO:0005525
Lal18g1550 285 PANTHER MONOMERIC G-PROTEIN 73 284 - -
Lal18g1550 285 SMART rab_sub_5 97 268 - -
Lal18g1550 285 Gene3D - 86 275 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1550 Lal-Chr18 17227691 17230045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1550 K07976 - gmx:100788413 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1550 18 17227691 17230045 Lal6g0082 6 487363 492377 LSH
Lal18g1550 18 17227691 17230045 Lal18g1550 18 17227691 17230045 PCT
Lal18g1550 18 17227691 17230045 Lal6g0082 6 487363 492377 PCT
Lal6g0082 6 487363 492377 Lal18g1550 18 17227691 17230045 PCT