Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1402 ATGAAGGTTATTCAGTCGTGGGTTTCAGAGCACAAGCTAGCCACCATTGGTGGATTGTGGGCCTCTGGAATTGGAGCATCGTTTATGGCTAATTCACGTACAACCTCTCCAATGAAGCCAAGTCTTAGGCTCATTCATGCCAGGATGCATGCTCAAGCATTAACACTAGCAGTGTTGTGTGGTGCTGCCACTTATCGCTATTACGAGAACACAAAACCATAG 222 0.464 MKVIQSWVSEHKLATIGGLWASGIGASFMANSRTTSPMKPSLRLIHARMHAQALTLAVLCGAATYRYYENTKP 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1402 73 Pfam Hypoxia induced protein conserved region 10 61 IPR007667 -
Lal18g1402 73 ProSiteProfiles HIG1 domain profile. 1 73 IPR007667 -
Lal18g1402 73 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 4 71 - -
Lal18g1402 73 Gene3D - 13 72 - -
Lal18g1402 73 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 4 71 IPR040153 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1402 Lal-Chr18 16233312 16234272 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1402 - - lang:109340630 134.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1402 18 16233312 16234272 Lal18g1402 18 16233312 16234272 ECH
Lal17g1604 17 17416438 17417340 Lal18g1402 18 16233312 16234272 PCT
Lal18g1402 18 16233312 16234272 Lal17g1604 17 17416438 17417340 PCT