Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1604 ATGGATGCAATTCAATCATGGGTTTCAGAGCACAAGCTTTCTAGCATTGGTGCACTTTGGGCCACTGGTATTGGAGCATCACTTGTGGTTTTTTCACGTTCTAAGTCTCCAATGAAACCAAGTCTTAGGCTTATTCATGCTAGGATGCATGCACAAGCACTTACTCTTGCAGTGTTATCTGGTGCAGCAGCTTATCACTACTATGAGAATCGTGACATTGATCCAAAACCAATGAAGAATGTTCCTTCTTCTAATGCAACTTACATGCTTGAATGGGATCTTCACAATCCTTTCTAA 297 0.4108 MDAIQSWVSEHKLSSIGALWATGIGASLVVFSRSKSPMKPSLRLIHARMHAQALTLAVLSGAAAYHYYENRDIDPKPMKNVPSSNATYMLEWDLHNPF 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1604 98 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 2 77 IPR040153 -
Lal17g1604 98 Gene3D - 13 71 - -
Lal17g1604 98 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 2 77 - -
Lal17g1604 98 Pfam Hypoxia induced protein conserved region 10 61 IPR007667 -
Lal17g1604 98 ProSiteProfiles HIG1 domain profile. 1 77 IPR007667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1604 Lal-Chr17 17416438 17417340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1604 - - gmx:100500345 149.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1604 17 17416438 17417340 Lal17g1604 17 17416438 17417340 ECH
Lal17g1604 17 17416438 17417340 Lal18g1402 18 16233312 16234272 PCT
Lal18g1402 18 16233312 16234272 Lal17g1604 17 17416438 17417340 PCT