Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1311 ATGGCTCTGCATTTTCTTTTGCTGCTACTTGTAGTGTCTGTTGTTGCAGCTGAAGAAGAACCATTTATTGGGGTGAATATTGGAACAGATCTCTCAGATATGCCACACCCTACTCAAGTAGTGGCACTACTTAAAGCCCAGAAAATTCAACATGTTCGGTTGTTTGATGCTGACCAAGCTATGCTCATTGCACTTGCTAAAACAGGTATTGAAGTTGTTGTAACTGTCCCGAATGACGAGCTTCTAGCAATTGGTCAATCAAATTCCACAGCTGCCAATTGGGTTTCCCACAATGTAGTAGCACATTATCCTGCCACCAATATCACAGCGATATGTGTTGGTTCTGAGGTTTTAACTACTCTCCCTAATGCAGCTAAGGTACTTGTCAATGCTATTAAGTACATCCATTCGGCACTCGTTGCGTCCAATCTTGATCGCCAAGTTAAAGTTTCTACACCCCTTTCCTCTTCCATCATCCTTGATTCATTTCCGCCTTCTCAGGCTTTCTTTAACCGCTCGCTGAATCCGGTTTTAGTCCCAATGCTTGATTTCCTACAGTCAAGTGGCTCATATCTCATGCTCAATGTTTATCCTTACTATGATTACATGCAATCAAATGGTGTCATTCCATTAGATTACGCACTCTTCAAGCCACTCCCCCCGAATAAAGAAGCTGTTGATTCTAATACCCTTCTTCATTACACCAATGTCTTTGATGCTATGGTTGATGCAGCATACTTTGCCATGGCTTTTCTAAATTACACCAACATTCCTGTAGTTGTAACTGAGTCAGGATGGCCCTCAAAAGGTGACAGTAATGAGCCAGATGCAACGGTAGATAATGCTAATACATACAACAGCAATTTGATTAAGCATGTTCTGAACAAAACTGGAACTCCCAAACATCCTGGAATTGCTGTTAGTACTTATATGTATGAGCTCTACAACGAGGATGCCAAGGCTGGACCATTGTCAGAGAAAAACTGGGGACTTTTCGATTCAAATGGTGAACCTATTTACATTTTGCGTTTGACGGGTTCCGGAGCAACCTTAGCAAATGATACCAGCAATTCAACTTTCTGTGTTGCAAAGGATGGCGCTGACCCAAAGATGCTGCAGGCTGCACTAGATTGGGCATGTGGACCTGGCAAAGTGGAATGCTCTCTATTGCTGCAAGGACAACCATGCTATGAACCGGACAATGTGATTGCACACGCAAATTATGCTTTTGACAGTTACTATCATAAGATGGGAAAGACTCCTGATTCATGTGACTTCAATGGAGTGGCTACAATCTCCTCCACAGATCCAAGTCATGGTTCTTGTATATTTCCAGGAAGTCTTGGCAAAAATGGCACCTTGGCTAACTTCACAGCACCATCAATGAATTCTACAAATTCAGATTCTTCAGCCTACAACCTCCAAAAATGTGAATTGAGAATTAGAAGCCTTCTAATGGTCTTAGGGTTTATATTATGTGGAGTAGTTTTGCTATAA 1497 0.4188 MALHFLLLLLVVSVVAAEEEPFIGVNIGTDLSDMPHPTQVVALLKAQKIQHVRLFDADQAMLIALAKTGIEVVVTVPNDELLAIGQSNSTAANWVSHNVVAHYPATNITAICVGSEVLTTLPNAAKVLVNAIKYIHSALVASNLDRQVKVSTPLSSSIILDSFPPSQAFFNRSLNPVLVPMLDFLQSSGSYLMLNVYPYYDYMQSNGVIPLDYALFKPLPPNKEAVDSNTLLHYTNVFDAMVDAAYFAMAFLNYTNIPVVVTESGWPSKGDSNEPDATVDNANTYNSNLIKHVLNKTGTPKHPGIAVSTYMYELYNEDAKAGPLSEKNWGLFDSNGEPIYILRLTGSGATLANDTSNSTFCVAKDGADPKMLQAALDWACGPGKVECSLLLQGQPCYEPDNVIAHANYAFDSYYHKMGKTPDSCDFNGVATISSTDPSHGSCIFPGSLGKNGTLANFTAPSMNSTNSDSSAYNLQKCELRIRSLLMVLGFILCGVVLL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1311 498 Pfam X8 domain 360 431 IPR012946 -
Lal18g1311 498 Gene3D - 353 444 - -
Lal18g1311 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 6 483 IPR044965 GO:0004553|GO:0005975
Lal18g1311 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 257 270 IPR000490 GO:0004553|GO:0005975
Lal18g1311 498 Gene3D Glycosidases 22 348 - -
Lal18g1311 498 SMART X8_cls 359 444 IPR012946 -
Lal18g1311 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 6 483 - -
Lal18g1311 498 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Lal18g1311 498 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1311 Lal-Chr18 15627580 15634005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1311 17 488 Glycoside Hydrolase AT1G66250 73.207 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1311 K19891 - gmx:100799965 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1311 18 15627580 15634005 Lal18g1311 18 15627580 15634005 ECH
Lal3g0526 3 3852190 3855796 Lal18g1311 18 15627580 15634005 LSH
Lal3g0526 3 3852190 3855796 Lal18g1311 18 15627580 15634005 PCT
Lal18g1311 18 15627580 15634005 Lal18g1311 18 15627580 15634005 PCT