Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1298 ATGGATCCTAAAGAATTATTCTCCACCAATGTCATAGATGACACTATTGCCTCACACGTCAAGAGGCAATGCAGTCCTCAACCTTCAGTTATTGTTATTGGAGCTGGAATATCGGGAATTGCTGCTGCACGTAGACTCTATGATGCGTCCTTTAAGGTGACTGTACTGGAGTCGCGGGATAGGGTTGGTGGCCGGATTCATACTGATTACTCATTTGATTGTCCAGTAGATATGGGAGCCTCATGGCTACATGGTGTTTGTAATGAGAATCCCATGGCTCCACTGATACGTGGTTTAGGACTTAAATTATATCGTACGAGTGGTGATGACTCTATCTTGTATGACCATGACTTGGAAAGTTATATGCTTTTTAACATGGATGGTCATCAAGTTCCTCCACATATGGTCACAGAAGTTGGAGAAAATTTTAAGAGAATCATGGAAGAGACTGAGAAAGTGAGGGATGACCATCCTGATGACATGTCAGTTCACCAAGCGATTTCAATCGTGTTAAATAGGCATCCAGAACTAAGGCAACAAGGACTTGCCCATGAAGTACTGCAATGGTATATATGCAGAATGGAAGCTTGGTTTGCTGCTGATGCAGATATGCTTTCACTGAAAACCTGGGATCAGGCAAATGTCCTCTCTGGTGGTCATGGACTCATGGTGCAAGGATATGATCCTGTTATAAAAGCTCTCGCAAAAGATCTTGACATACGCTTGAACCACAGGGTGATCAAGATATCCAATGGTTGCAATAAGGCAATGGTCACAGTTGAGGATGGCCGGAACTTTGTTGCTGATGCGGTTCTTGTAACAGTTCCTGTCGGAGTTCTACAGGCACAGTTAATAGAGTTTGTACCAAAACTTCCGGATTGGAAGTTTGCTGCAATTAAAGATCTTGGTGTGGGAAATGAAAATAAGATTGCCCTAAGATTTGATAAAGTGTTTTGGCCTAATGTAGAATTTCTAGGCATTGTTGCACCAACCTCTTACGCTTGTGGCTATTTTCTCAATCTGCATAAAGCAACCGGGCATCCGATTCTTGTATATATGGCAGCTGGAAGGTTTGCTTGTGATCTTGAGAAACTATCGAACGAGTCTACTGTAAATTTTGTAATGCTACAGCTCAAGAAGATGTTTCCTGGTGCTTCTAATCCGATTCAATATCTTGTGTCACGTTGGGGATCTGATCCAAACTCGTTTGGCTGTTACACATACGATTTAGTAGGAAAGCCGGATGATTTGTATGACCGACTTCGTGCACCCTTAGGTAATCTATTTTTTGGCGGGGAAGCTGTTTGCATGGATGATCACCAGGGATCTGTGCATGGTGCTTACTCTGCTGGGATAATGGCTGCTGACAACTGTCATAAATATATTTTAGAGAAACAAGGGCACATGGAAAATCCACCTCTAGTTTCTGTTAGGCATGAAATACTTGAAACTACAATACCTCTTCAGATCTCAAGGATCTGA 1482 0.4238 MDPKELFSTNVIDDTIASHVKRQCSPQPSVIVIGAGISGIAAARRLYDASFKVTVLESRDRVGGRIHTDYSFDCPVDMGASWLHGVCNENPMAPLIRGLGLKLYRTSGDDSILYDHDLESYMLFNMDGHQVPPHMVTEVGENFKRIMEETEKVRDDHPDDMSVHQAISIVLNRHPELRQQGLAHEVLQWYICRMEAWFAADADMLSLKTWDQANVLSGGHGLMVQGYDPVIKALAKDLDIRLNHRVIKISNGCNKAMVTVEDGRNFVADAVLVTVPVGVLQAQLIEFVPKLPDWKFAAIKDLGVGNENKIALRFDKVFWPNVEFLGIVAPTSYACGYFLNLHKATGHPILVYMAAGRFACDLEKLSNESTVNFVMLQLKKMFPGASNPIQYLVSRWGSDPNSFGCYTYDLVGKPDDLYDRLRAPLGNLFFGGEAVCMDDHQGSVHGAYSAGIMAADNCHKYILEKQGHMENPPLVSVRHEILETTIPLQISRI 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1298 493 PANTHER FLAVIN MONOAMINE OXIDASE 8 492 - -
Lal18g1298 493 Pfam Flavin containing amine oxidoreductase 37 457 IPR002937 GO:0016491
Lal18g1298 493 PRINTS Flavin-containing amine oxidase signature 29 48 IPR001613 GO:0016491
Lal18g1298 493 PRINTS Flavin-containing amine oxidase signature 307 326 IPR001613 GO:0016491
Lal18g1298 493 PRINTS Flavin-containing amine oxidase signature 388 407 IPR001613 GO:0016491
Lal18g1298 493 PRINTS Flavin-containing amine oxidase signature 440 457 IPR001613 GO:0016491
Lal18g1298 493 PANTHER POLYAMINE OXIDASE 4 ISOFORM X1-RELATED 8 492 - -
Lal18g1298 493 Gene3D - 109 414 - -
Lal18g1298 493 SUPERFAMILY FAD/NAD(P)-binding domain 27 462 IPR036188 -
Lal18g1298 493 SUPERFAMILY FAD-linked reductases, C-terminal domain 303 408 - -
Lal18g1298 493 Gene3D - 30 456 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1298 Lal-Chr18 15520761 15527084 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1298 K17839 - gmx:100790521 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1228 5 15042872 15048415 Lal18g1298 18 15520761 15527084 PCT
Lal18g1298 18 15520761 15527084 Lal5g1228 5 15042872 15048415 PCT