Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0740 ATGAAGATAGAAAAGGAGACAATAGGTGAATCTAGAGACTTTGGACCAAAGGTTAAAGAAACATGGTGGTGGGATAAAAGTGTTGAAGACAAAGTTAAGGTGAAAAGGGAATATTATAAAACGTGGTCCTTATATAAAAATACTGAAATTAAAGCCAAAGTGAAAAAGGTTGTTATTGGGATAGTGGATCCAAATCCCATTGTGGCCTCCAAAGGGGTGGATAGATTGAGAGATGCAGGAATTGAAGTCGTTGTGGGCGTAGAAGAAGACTTGTGCAAGAATATTCCTCTTTCTGTCAATGGTAATTTTTTGGACTTACTTGGGGATGGAGTTGCAGACCGTGGTGGATACTATTCGCGGCTATTACAAGAATATGATGCTGTATTATTGTCTTCTTCATTAACCAGTGAAAATTTATCAGTATCCGCATCTAATGAATCTGGAGCCAATCAACCGTTTCGGATTATAATACATAAAGATCTTAGTTCTCCAAATCAAATTCCTCCAGTCATCAATGAAGTTACCGGCAAAGTGGTAGTTTTCACAGATTATAAAACAGCAAAATTTCCAGAAGTGGCTCAACAAGGGATTGAAACTGTAGCTCTGGATCAGATAAATCTGGATGTGATCTTAGATTATTGTAATCATCAAGGATTATGCAGTGTTCTGTTAGACATGAGGGGTGATTTCAGTGTGTTTGAAGATCTTGTTAAGAAGGGTATTAAGAAGAGATACATTAATAAATTCGTGACGGAATTTTTGCCAGTTTGGAATGGATGTGCGCAGACCGATCCTCTAATGCCATTAAAGAAATTAGAGCATGTAAAAGTGGTAAATTTACAGTCCAAGGTTTCAGATCAGAGTGTTGTAGTTGAAGGATGTTTTAAATATTAA 894 0.368 MKIEKETIGESRDFGPKVKETWWWDKSVEDKVKVKREYYKTWSLYKNTEIKAKVKKVVIGIVDPNPIVASKGVDRLRDAGIEVVVGVEEDLCKNIPLSVNGNFLDLLGDGVADRGGYYSRLLQEYDAVLLSSSLTSENLSVSASNESGANQPFRIIIHKDLSSPNQIPPVINEVTGKVVVFTDYKTAKFPEVAQQGIETVALDQINLDVILDYCNHQGLCSVLLDMRGDFSVFEDLVKKGIKKRYINKFVTEFLPVWNGCAQTDPLMPLKKLEHVKVVNLQSKVSDQSVVVEGCFKY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0740 297 Gene3D Cytidine Deaminase, domain 2 47 100 - -
Lal18g0740 297 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 50 135 - -
Lal18g0740 297 PANTHER RIBOFLAVIN BIOSYNTHESIS PROTEIN PYRD, CHLOROPLASTIC 50 135 - -
Lal18g0740 297 SUPERFAMILY Dihydrofolate reductase-like 118 260 IPR024072 -
Lal18g0740 297 SUPERFAMILY Cytidine deaminase-like 50 95 IPR016193 GO:0003824
Lal18g0740 297 Gene3D Dihydrofolate Reductase, subunit A 110 293 IPR024072 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0740 Lal-Chr18 8693923 8695827 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0740 K11752 - gmx:100786393 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0740 18 8693923 8695827 Lal18g0740 18 8693923 8695827 ECH
Lal22g0827 22 6186015 6189393 Lal18g0740 18 8693923 8695827 LSH