Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0429 ATGGACATGGATATTGAAGAACAACCTTCACCCAACAGCCTTAAACGCTTTGGTCTTAAAACTTCTATTCAAACCAACTTTGGCGATGACTATGTTTTCCAAATCATCTCAAAGGATGATTGGAGTTCAATGGCAGTGTCACTTTCAACGAATACAGTTAAACTGTATTCACCAGAGATGGGTCAATATTATGGAGAGTGCAAGGGTCACCATGCAACTATCAACCAGATTTTGTTCTCAGATGCTTCAAATGCTCATGTTTTAAACTCTTGTTCTTCAGATGGAACTATTAGAGCTTGGGACACAAGAACATTTCAGCAGGTTTCTTCCATTAATGCCGGTCCTTCTCAGGAGGTCTTCAGCTTCTCTTTTGGAGGGCCTGGTGGAAATTTAATTGCTGCCGGGTGTAAATCACAGATACTCTTTTGGGATTGGAGAAATAAGAAGCAAATTGCATGCCTTGAAGAATCTCATGTGGATGATGTTACTCAGGTTCATTTTGTCCATGAAGAACAAGGCAAGCTTATTTCTGCTTCAGTAGATGGATTGATATGCACATTTGATATCACCGGAGATATCAATGATGATGATCATCTGGAATCAGTGATTAATGTGGGGACTTCGATTGCCAAAGTCGGGATTTTTGGAGATTATCAGAGGCTCTGGTGTCTAACACATATTGAAACCTTGGGTATCTGGGACTGGAAAAATGGTAGAAATGAAGTAAACTTCTCAGATGCTCGTAGTTTAGCTTCTGAAAGTTGGAATTTGGATCAAGTTGACTATTTTGTTGATTGCCACTACTCTAAAGAAGCTGAAAAACTATGGCTGATCGGTGGCACTAATGCCGGTACATTGGGCTACTTTCCTGTAAATCACAAGGGAGTGGCAACTATTGGAGGTGCAGAAGCAATTCTCGAGGGCGGCCATACAAGCATTGTTAGGAGTGTTTTACCCATGTCAAGATTTCATGGCGCACCTGCTCCTAGTAGTGGTAGCTCTGGCATTTTTGGATGGACAGGTGGGGAAGATGGTCGTCTATGTTGTTGGTTGGCCGATGATTCCCCTCAAATAAATCGATCGTGGATTTCAAGCACACTGATTATGAAGCCAGAAAAGAGTAGCAAGAAAAATCGTCACCACCCCTATTAG 1152 0.4175 MDMDIEEQPSPNSLKRFGLKTSIQTNFGDDYVFQIISKDDWSSMAVSLSTNTVKLYSPEMGQYYGECKGHHATINQILFSDASNAHVLNSCSSDGTIRAWDTRTFQQVSSINAGPSQEVFSFSFGGPGGNLIAAGCKSQILFWDWRNKKQIACLEESHVDDVTQVHFVHEEQGKLISASVDGLICTFDITGDINDDDHLESVINVGTSIAKVGIFGDYQRLWCLTHIETLGIWDWKNGRNEVNFSDARSLASESWNLDQVDYFVDCHYSKEAEKLWLIGGTNAGTLGYFPVNHKGVATIGGAEAILEGGHTSIVRSVLPMSRFHGAPAPSSGSSGIFGWTGGEDGRLCCWLADDSPQINRSWISSTLIMKPEKSSKKNRHHPY 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0429 383 SUPERFAMILY WD40 repeat-like 33 245 IPR036322 GO:0005515
Lal18g0429 383 Gene3D - 36 117 IPR015943 GO:0005515
Lal18g0429 383 Gene3D - 118 366 IPR015943 GO:0005515
Lal18g0429 383 ProSiteProfiles Trp-Asp (WD) repeats profile. 67 110 IPR001680 GO:0005515
Lal18g0429 383 SMART WD40_4 147 188 IPR001680 GO:0005515
Lal18g0429 383 SMART WD40_4 104 144 IPR001680 GO:0005515
Lal18g0429 383 SMART WD40_4 60 101 IPR001680 GO:0005515
Lal18g0429 383 PANTHER UNCHARACTERIZED 13 383 IPR039328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0429 Lal-Chr18 3585638 3590371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0429 K24758 - gmx:100794786 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0267 5 2329108 2335643 Lal18g0429 18 3585638 3590371 LSH