Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0412 ATGTCAACACCATTCTCACATGCTTCTCTTCTCTTCCTATTTTTCATCTCAACCTTTTCCATTTCTCTTGCTTCTCCTGATTCTATCTACGGTTGCGGTGGATTTGTTCAGGCGAGTTCATCGTTGGTAAAGTCGAGGAAACAAACTGATTCTAAGTTGGACTATTCTCATGTCACGGTTGAGCTTCAAACACTGGATGGGCTGGTAAAGGATAGCACACAATGTGCTCCAAATGGATACTATTTTATTCCAGTGTATGACAAGGGTTCCTTTGTTATTAAAATCAATGGGCCTGAAGGATGGTCATGGGATCCAGAAAAGGTTCCCGTAGTGGTTGACAACCACGGTTGTAATGGCAATGAGGATATAAACTTTCGTTTCACAGGGTTCACTATATCCGGTAGAGTTGTGGGAGCTGTAGGTGGAGGAAGCTGTTCAGTTAAAAATGGAGGTCCTTCAAATGTAAAAGTGGAACTATCGTCTCCTTCTGGGGATCTTCTCTCTTCTGTCTTAACCTCACAATCTGGGAGTTACTTATTTACAAATATAATTCCAGGTGGGGAAGTATACCTTCACACCTGCAAGGATCTTGTCTTTGAATTATATTATAGGTGCACAGCTAGGTACTTGTTAGTAGGAAAGTATGAACTGCATGCTTCAAATCCTGATATGAAAGTTGAAGTTAGAGGTTCAACACAGGTGGAATTGGGCTTTGGAAATGTGGTAGTTGATGATGTTTTCTTTGTCCCTGGGTATAGTATCAGTGGGTTTGTTGTTGCTCAGGGAAATCCAATACTAGGAGTTCATATTTTCTTATACTCAGATGATGTTTCTGAGGTGGAATGTTTGCATGGTTCTGCTAATGGTCCAAGACAAGGAGCAGCCCTCTGTCACGCTGTCTCAGATGCTGATGGAAAGTTCACATTCAATTCAATACCTTGTGGAAGTTATGAACTTGTGCCCTACTATAAGGGTGAAAATACAGTATTTGATATTTTGCCATCCAGCGTCTCAGTTAATGTTAAGCATCAACATGTAATGGTGCCTCAGAAATTTCAGGTAACTGGATTTTCCATTGGTGGCCGTGTGGTTGATGGAAATGAAGTGGGAGTGGAGGGTGTTAAAATCACAGTGGATGGTCATGAAAGGTCTATTACTGACAATCAAGGATATTATAAGCTTGATCAGGTTACATCTAAGCACTATACCATAGAGGCCAGAAAGGAGCATTACAAATTCAAGAAGTTGGAGAAGTACATGGTTTTGCCAAATATGGCTGCAATAGAAGACATTAATGCCATTTCATATGATATTTGTGGTTCAGTTAGGATGGTTAGTGCTGGTCTGAAAGCAAAGGTGGCTTTGACTCATGGACCTGAGAATGTGAAACCACAAAAGAAACAAACAGATGGAAATGGAAACTTCTGCTTTGAGGTTCTGCCTGGTGAATATCGCTTGTCAGCTATTGCTGCTTCTCCCGAGAATGCTCCTGGACTCTTGTTTTTGCCTTCTTATATTGATGTTGTGGTCAAAAGTCCATTATTGAATGTTCAATTTTCACAGACTCTGGTCAATATTCACGGTGCTGTAACCTGCAAGGAGAAATGTGGTCCGTCTGTATTTGTGACTCTTGTGAGACAGGCTAATAAACATAATGAAGAGAGAAAGACAATTCACTTGACTACTGAGAGTAGTGAATTTCATTTTTCAGATGTTATTCCTGGAAAATACAGGCTTGAGGTCAAACATAGTTCCCCTGATTCAGTGACCTTGGAAGATAATTGGTGCTGGCAGCAGAGCTTCATTGATGTAAATGTTGGAGCTGAAGACTTGGAAGGAATTTTGTTTGTTCAAAAAGGCTACTGGGTCAATGTTATCTCCACTCATGATGTTAATGGTTACATAACTCAACCAGATGGGTCAACTGTGAATTTGAAGATTCAGAAAGGATCCCAGCATATATGTATAGAATATCCTGGAGTACATGAATTTAATTTTGTTGACTCTTGCATCTTATTCGGGAGCTCATCTGTGAAAATTGATACATCTAATCTATCGCCCATCTATCTAAAAGGGGAAAAATATCTTCTTAAAGGACAAATAAACGTGCAGTCTAGCTCCCTTAATGCATTGCCTGAGAATATAGTTGTTGATATTCAAAAGGATGGAGTTGGTTCTTTTGATTCTGCTAAGGCCATACTTAAATCCCATGAGAAAGATCAAACAAATACTGCTATATTTGAGTATTCTGTTTGGGTCAATCTTGGAGAAAAGCTTACTTTTGTTCCTCGGGATTCAAGGAATGATGGGGAGAAGAAATTTTTATTTTATCCTAGAGAACATCATGTATCAGTAGCAGGTGATAATTGTCAAGCTTATGTTCCTGCATTTTCTTGTCGACTGGGAGTATATATTGAAGGATCAGTTTCACCTCCTCTTACTGGTGTTAATATCAAGGTTTTTGCTGCTGGAGATAGCAGCATTGCCTCACTGAAAAGTGGTGAAATAGTACTTGAAACGAGCACTGGTACTGATGGCTCCTATGTGACAGGTCCTCTGTATGATGATATTGGTTACAATGTTGAGGCTTCAAAGCCTGGTTATCATATAAAACAAGTTGAGCCTCATTCCTTTAGTTGTCAGAAGCTTAGTCAAATTTCTGTACGCATACATCATATAGATGATGCTAAAGAACTCATTCCTTCCGTTCTCTTATCTTTGAGTGGTGACAATGGCTATAGAAACAACTCAGTATCTGGGGTTGGAGGGACATTCCCATTTGATAATTTATTCCCTGGAATGTTCTACTTACGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTCCATCACAGGCAATAGACCTTGGAGCGGGGGAGGTTAAAGAAGTTATTTTCCAGGCCACACGCGTAGCTTACAGTGCTACAGGCTTAGTCACTCTGTTGTCAGGCCAACCCAAAGGAGGAGTTTCAGTTGAAGCCCGGGCAGAGTCAAAAGGCTATTTTGAGGGAACTGTGACTGATTCCTCTGGAAATTACCGTCTGAGAGGATTACATCCTGATACTATCTATGTTGTAAAAGTATCTAAAAGGGATGTTTTGGGCAATTCTAATATAGAGCGTGCATCTCCAGATTCTGTTGCTGTCAAGGTTGGAACTGAGGATATTAAGGGTTTAGATTTTATAGTTTTTGAAGAGCCAGAAATAACAATTATAAGTTGTCACGTTGAAGGAAACACTACAGATGAACTACATAAACACCTAATGGTAGAAATCAAGTCAGCTAGTGACACGACGAAGACAGAATCTGTCTTCCCCCTGCCAATTTCTAATTTCTTTCAAGTCAAGGGTTTATCTAAGGGCAGACACCTTCTACAACTTAGATCTGCTCTCCCTCCAAGCTCCCTTAAATTTGAATCTGATATCATTGAGGTTGACTTGGAGAAAAATATTCAAATCCATGTCGGCCCACTGAGATACAGGATTGTTGAAGATCAGCTGAAACAGGAGTTAACTCCGGCACCGGTATTAACTCTTGTAGTTGGATTTCTATTTATTGCACTTGTTTTCAGTATCCCAAGGACATTTATTAAGAGTTTCCATAGAACTAGTAGCAATATCATCACCTTTACAAACCAAGTTAAATACCTTAAGTACCCATCTTTGCTTCATAGGTCAAACCTCAATGACCATACTCTCATATTTGATGTAGAAAATGCTCTATTGAAGTCTTCTTCTATGTTCCCATATTTCATGCTTGTTGCCTTTGAAGCAGGAGGGTTACTTAGAGCTATTGTTTTGATTCTATTATACCCTTTTGTTTGTTTAGTTGGAGATGAAATGGGTCTCAAGATAATGGTCATTATATGCTTCTTTGGGATCAAAGTTGAGAATTTTAGAGTTGGAAGTGCTGTTCTACCCAAATTTTTCTTGGAAGATGTTGGTTCTGAAATGTTTGAGGTGCTGAATAGAGGTGCTAAAAAAGTGGGGCTTAGTAAGTTACCAAGAGTGATGGTGGAAAGTTTCTTGAAAGAGTATTTGGAGATTGATGTTGTTGTGGGGAGAGAGATTAAAGTGTTATTTGGTTACTATGTAGGGTTGATGGAGGAAAGAGAAAAAAGCATGCATGCTTTGGAGTTAGTTCATGAAAGGAAAGGGTGTTGTTCTAATATCATTGGAATTTCAGGATTACATAAGAATATTGACAATGACTTCTTCTTTTCTTGTTGCAAGGAAGTCTATGTGGTGGTAGAAGGAGACAAGAAAAGGTGGCAAAAGCTAGCAAGGGATAAATACCCAAAATCACTTATTTTCCATGATGGAAGATTAGCACTCAAACCCACACCACTTGATGTTATAGCCATATTAATGGTTTTGATGGGTACTGAGAGGAAGAGGAAAGTGAGCTTATTCGATGTAGTAGACGACGGTTCCACAAAGATTGTGAAATCAAATGGTGGCGCAAACAACAACAATCTCATTAATCCATGGAATTTAAGGCCTTACTCTCAGAGATACTTGGATATTTTGGAGAAGAGAAAAACTCTCCCTGTTTGGCACCAGAAAGATGAGTTTTTGAAGGCTTTGAAAGAGAATCAGACTTTGATTTTGGTTGGTGAGACTGGTAGTGGTAAAACCACACAGATCCCTCAGTTTGTTTTAGATGCTGTCGAGTTAGAAACTCCTGATAAACGCAGGAAGATGATGATTGCATGCACTCAACCTCGGAGAGTGGCTGCAATGTCTGTTTCCCGGCGTGTGGCTGAAGAGATGGATGTAACTATTGGGGAAGAGGTTGGTTACAGTATCAGATTTGAAGACGTCAGTAGTGCAAAGACAGTTTTGAAGTATCTCACTGATGGTATGCTCTTAAGAGAAGCAATGGCAGATCCACTTTTGGAACGATACAAAGTAGTTATCCTTGATGAGGCACATGAAAGGACCTTAGCTACAGATGTGTTATTTGGCCTTCTGAAGGAAGTGCTTAAAAATAGACCTGACATGAAGCTGGTTGTTATGAGTGCAACTCTTGAGGCTGAAAAGTTTCAGGGTTATTTTTATGGTGCCCCTCTTATGAAAGTTCCTGGGAGGCTCCATCCAGTGGAGATTTTCTATACTCAGGAACCTGAGAGAGATTACTTGGAGGCTGCCATTAGGACAGTGGTGCAAATACACATGTGTGAACCTCCTGGAGACATACTTGTTTTTTTGACTGGAGAGGAAGAGATAGAAGACGCGTGCCGCAAAATAAACAAAGAGATTGGAAACCTTGGTGACCAGGTGGGTCCTGTGAAAGCAGTACCCCTGTATTCCACTCTTCCCCCGGCTATGCAGCAGAAGATTTTTGAGCCAGCTCCACCTCCGCTGAAGGAGGGAGGGCCTCCTGGAAGGAAGATTGTGGTATCAACAAACATTGCAGAAACTTCTTTAACAATTGATGGTATTGTCTATGTTATTGACCCCGGGTTTGCTAAGCAGAAGGTTTATAATCCACGAATCCGTGTTGAGTCTTTGTTAGTGTCTCCAATATCAAAAGCCAGTGCACATCAGAGATCAGGGCGTGCTGGTAGAACTCAACCAGGGAAATGTTTTAGACTTTATACTGAGAGAAGTTTCAATAATGATCTTCAGCCACAGACTTATCCTGAAATTTTGAGATCAAATCTTGCCAACACAGTTCTTACCTTGAAGAAGCTCGGTATAGATGATTTAGTGCATTTTGATTTCATGGACCCTCCTGCCCCAGAGACCTTAATGCGTGCATTGGAAGTATTGAATTACTTGGGTGCACTGGATGATGACGGTAACTTAACAAAGCTCGGTGAGATAATGAGTGAGTTTCCCTTGGACCCACAGATGTCAAAGATGCTTGTTGTCAGTCCTGAATTCAACTGTTCAAATGAGATTCTGTCAATTTCTGCAATGCTCTCAGTCAAGTGTCCTGTTAGGTTGTCATCAGCAACTGTCTTCTCTGGCTTCCATGCCCCCGGTTGGCATGCACCAAAGGATTCTAAGGAGGCACAAAAAGCTGCGGATGAAGCAAAAGCTAGGTTCGGGCACATTGATGGAGATCATCTCACACTCTTGAATGTCTACCATGCGTACAAGCAAAATAATGAAGATCCCTCTTGGTGCTATGAGAACTTCATTAATCAAAGGGGACTGAAATCAGCTGATAATGTTAGACAACAACTAGTGCGTATCATGGGCCGGTATAACCTGAAGTTATGCAGCACTGACTTTAATAGCCGTGACTACTATATCAACATAAGGAAGGCTATGCTTGCTGGATATTTTATGCAGGTTGCTCATCTGGAGCGTACAGGACACTACTTGACAGTGAAAGATAACCAGACGGTGCATTTGCATCCATCAAATTGCTTGGATCACAAGCCTGAATGGGTAATCTACAATGAGTTTGTTCTTACCAGTCGAAATTTTATTCGTACTGTGACAGACGTAAAAGGGGACTGGTTGGTTGATATAGCACCACATTACTATGATCTGCAAAATTTTCCAAATTGTGAGGCCAAGCGTGTTCTTGACAAACTTTACAAGAAGCGAGAGAGGGAAAAGGATGAAGGAAAGAGCCGAAAATGA 6597 0.4058 MSTPFSHASLLFLFFISTFSISLASPDSIYGCGGFVQASSSLVKSRKQTDSKLDYSHVTVELQTLDGLVKDSTQCAPNGYYFIPVYDKGSFVIKINGPEGWSWDPEKVPVVVDNHGCNGNEDINFRFTGFTISGRVVGAVGGGSCSVKNGGPSNVKVELSSPSGDLLSSVLTSQSGSYLFTNIIPGGEVYLHTCKDLVFELYYRCTARYLLVGKYELHASNPDMKVEVRGSTQVELGFGNVVVDDVFFVPGYSISGFVVAQGNPILGVHIFLYSDDVSEVECLHGSANGPRQGAALCHAVSDADGKFTFNSIPCGSYELVPYYKGENTVFDILPSSVSVNVKHQHVMVPQKFQVTGFSIGGRVVDGNEVGVEGVKITVDGHERSITDNQGYYKLDQVTSKHYTIEARKEHYKFKKLEKYMVLPNMAAIEDINAISYDICGSVRMVSAGLKAKVALTHGPENVKPQKKQTDGNGNFCFEVLPGEYRLSAIAASPENAPGLLFLPSYIDVVVKSPLLNVQFSQTLVNIHGAVTCKEKCGPSVFVTLVRQANKHNEERKTIHLTTESSEFHFSDVIPGKYRLEVKHSSPDSVTLEDNWCWQQSFIDVNVGAEDLEGILFVQKGYWVNVISTHDVNGYITQPDGSTVNLKIQKGSQHICIEYPGVHEFNFVDSCILFGSSSVKIDTSNLSPIYLKGEKYLLKGQINVQSSSLNALPENIVVDIQKDGVGSFDSAKAILKSHEKDQTNTAIFEYSVWVNLGEKLTFVPRDSRNDGEKKFLFYPREHHVSVAGDNCQAYVPAFSCRLGVYIEGSVSPPLTGVNIKVFAAGDSSIASLKSGEIVLETSTGTDGSYVTGPLYDDIGYNVEASKPGYHIKQVEPHSFSCQKLSQISVRIHHIDDAKELIPSVLLSLSGDNGYRNNSVSGVGGTFPFDNLFPGMFYLRPVLKEYAFSPPSQAIDLGAGEVKEVIFQATRVAYSATGLVTLLSGQPKGGVSVEARAESKGYFEGTVTDSSGNYRLRGLHPDTIYVVKVSKRDVLGNSNIERASPDSVAVKVGTEDIKGLDFIVFEEPEITIISCHVEGNTTDELHKHLMVEIKSASDTTKTESVFPLPISNFFQVKGLSKGRHLLQLRSALPPSSLKFESDIIEVDLEKNIQIHVGPLRYRIVEDQLKQELTPAPVLTLVVGFLFIALVFSIPRTFIKSFHRTSSNIITFTNQVKYLKYPSLLHRSNLNDHTLIFDVENALLKSSSMFPYFMLVAFEAGGLLRAIVLILLYPFVCLVGDEMGLKIMVIICFFGIKVENFRVGSAVLPKFFLEDVGSEMFEVLNRGAKKVGLSKLPRVMVESFLKEYLEIDVVVGREIKVLFGYYVGLMEEREKSMHALELVHERKGCCSNIIGISGLHKNIDNDFFFSCCKEVYVVVEGDKKRWQKLARDKYPKSLIFHDGRLALKPTPLDVIAILMVLMGTERKRKVSLFDVVDDGSTKIVKSNGGANNNNLINPWNLRPYSQRYLDILEKRKTLPVWHQKDEFLKALKENQTLILVGETGSGKTTQIPQFVLDAVELETPDKRRKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDVSSAKTVLKYLTDGMLLREAMADPLLERYKVVILDEAHERTLATDVLFGLLKEVLKNRPDMKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEIGNLGDQVGPVKAVPLYSTLPPAMQQKIFEPAPPPLKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVKCPVRLSSATVFSGFHAPGWHAPKDSKEAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFINQRGLKSADNVRQQLVRIMGRYNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQTVHLHPSNCLDHKPEWVIYNEFVLTSRNFIRTVTDVKGDWLVDIAPHYYDLQNFPNCEAKRVLDKLYKKREREKDEGKSRK 2198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0412 2198 SUPERFAMILY Cna protein B-type domain 893 954 - -
Lal18g0412 2198 PANTHER NODAL MODULATOR 1-RELATED 6 1195 - -
Lal18g0412 2198 SUPERFAMILY Starch-binding domain-like 248 332 IPR013784 GO:0030246
Lal18g0412 2198 Pfam DEAD/DEAH box helicase 1523 1679 IPR011545 GO:0003676|GO:0005524
Lal18g0412 2198 SMART ultradead3 1512 1703 IPR014001 -
Lal18g0412 2198 Gene3D - 359 438 - -
Lal18g0412 2198 SUPERFAMILY Carboxypeptidase regulatory domain-like 357 423 IPR008969 -
Lal18g0412 2198 Gene3D - 1903 2079 - -
Lal18g0412 2198 Pfam Helicase conserved C-terminal domain 1723 1857 IPR001650 -
Lal18g0412 2198 SMART helicmild6 1740 1858 IPR001650 -
Lal18g0412 2198 Gene3D - 1697 1879 IPR027417 -
Lal18g0412 2198 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 6 1195 - -
Lal18g0412 2198 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1719 1899 IPR001650 -
Lal18g0412 2198 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1525 1694 IPR014001 -
Lal18g0412 2198 CDD DEXHc_DHX15 1503 1693 IPR044756 GO:0003724|GO:0005524
Lal18g0412 2198 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 2089 2165 IPR011709 -
Lal18g0412 2198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1493 2085 IPR027417 -
Lal18g0412 2198 SMART ha2_5 1919 2028 IPR007502 GO:0004386
Lal18g0412 2198 CDD SF2_C_RHA 1698 1866 - -
Lal18g0412 2198 Gene3D - 1470 1696 IPR027417 -
Lal18g0412 2198 SUPERFAMILY Starch-binding domain-like 972 1030 IPR013784 GO:0030246
Lal18g0412 2198 Pfam Helicase associated domain (HA2) 1920 2027 IPR007502 GO:0004386
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0412 Lal-Chr18 3473698 3495147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0412 1183 1456 Acyl Lipid Metabolism Gene Families AT4G01950 53.597 1.63e-83 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0412 - - ccaj:109814730 1972.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0412 18 3473698 3495147 Lal18g0412 18 3473698 3495147 ECH
Lal5g0223 5 1907377 1911820 Lal18g0412 18 3473698 3495147 LSH