Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0161 ATGATTTCCTTCTCCATCTCTCGTTTTCCTTCAACAAGCCCTTCATTCTCATCACAACCAAGTGCAACTGTAACTGAAAGTTTTCGTCTTGACCTATACACCACAAGTTCTAACACCCCATCTCATAGTTTTGAACACAAGGTTCCTTCTGATGTAAAAGTTGGAAACTTTACGAGAAAAAGTGGGAGGAGAGTAATGGGGATGAACCCAATTGAGATTGGTGATGGTGGGTTTGGGAAGAATAAGAAAAAAGGGAAAGAGAAAATATATTGGGTTTGCAGCAATTGTGGGTACACTGCAGGGCAATGGTGGGGGGTGTGTAGGTCATGCACTGTAGCTGGGACTATGAAAGAGTTTCATGAGAGTAAAACAAGTGAAGTTCATAGTAAAGTTAATGGATTTATGGTTTTAGAAGAAGATGGTGTTGGATCATGGCTTCCTCAACAACAAGGTGAACTTAGGCCATTGAGATTGATAGATATTAATAGGGGACTTAATCATCAGCATTGGAGAATTCCTTTGTCTGGTTCTTTTGGAAATGAAGTTTCGAGAGTACTCGGTGGTGGTCTTGTACCAGGCTCTTTGAATTTAGTTGGCGGTGATCCTGGTGTTGGTAAAAGTACATTGTTGTTGCAGATTGCTGCAATGATCTCAGAAGGGGGCAATGATGGTGAAGTATATCCAGTAGTATATGTCTCTGGTGAAGAGAGTGTTGAACAAATTGGTAACAGAGCAGATCGCCTTATGATTGAATCAGATATTTATGTATATTCAAGTAATGATATCGAGGACATATTGAAGAAAGTTCGGGATATCTCCCCTCGGGCTCTAGTTGTTGATTCAATACAAACTGTTTATTTGAAAGGGATAATGGGAAGTCCTGGAGGCATTATTCAGGTGAAGGAATGTACTTCAGCTTTGCTGCGATTTGCGAAGACGACAAACATCCCGGTTCTTTTGATTGGACATGTTAATAAGTCTGGAGACATAGCAGGACCTCGTGTCTTGGAGCATATCGTTGATGTTGTTTTGTATATGGAAGGCGAGAAGTGCTCTTCCCATCGTATGCTTCGAGCTGTGAAAAATAGATTTGGATCCACTGACGAGCTTGGAATTTTTGAGATGTCACATTCAGGACTTCAGGCTGTTTCCAATGCCAGTGAAATGTTTCTCAGTGAACAACATTTAGATTCAGAAATTTTAGCTGGGATGGCTGTTGCTGTAATAATGGATGGGTCCCGAACATTCCTTATCGAAATTCAGGCACTTTGTCTTTCTGGTTCAACAGGATCAAGGCAAGTTAATGGAATCCATGCAAGTAGAGCTGATATGATCATATCTGTTCTCATAAAGCAAGCAGGTCTTCGTCTCCGAGAAAATAAATGTAGTGTGTCGCGAGTCCGCTCCGTTCATCTTAGGTCTATATGGCGAAGAGGTGTGATGTTTAATTTTGAATTCATCACACATCTCCATCGTCGCTTCCATCGGAGAAGAGAAGTGAAGCCACGAAAGGCTGTGTATTTGAATGTTGTTAGTGGATTCATATTGACTGAGACTGCAGGAGATCTTGCAGTAGCAGCTTCAATTTGCAGCAGTTTCTTGGAGCTCCCTATTCCAAATGACATCGCATTCATCGGTGAAATTGGTCTCGGTGGTGAGCTTCGCATGGTTCCTAGAATGGAGAAAAGGATACATACAGTGGCAAAATTGGGTTACAGAATGTGTGTAGTGCCAAAGGCAGCTGAAAAGGCTTTAGGAACTGAATCTTTAGAAAATATGAAAGTTGTTGGTTGCAGGAATCTGAAAGATGTTATTAACACTGGCCATGGAGGGAGTTTGGGAGCTACTAGGCTTGCAACTTCAGCTGTAGTAGCTTCAAAGGCTTCTTCGGGTGGTTTGTTTAGCTGGCTTACCGGGGAACGTTCTAGTTCTTTTCCTCCTTTGGATACACCCCTTGGAGGTATTGCTTTCCCTGATCCTCTACCAGATCATGTCGAACCAAGCAAGACCAAGATCACAACTCTCTCCAATGGTCTCAAAATAGCATCAGAGACCTCACCGAACCCTGCAGCCTCAATTGGGTTATATCTTGACTGTGGTTCCATCTACGAGACACCATTGTCAAGCGGGGCTTCACACTTGCTAGAGAGGATGGCTTTCAAGAGCACTACAAACCGTAGTCACTTCCGTATTGTAAGGGAAGTAGAAGCAATTGGTGGTAATATAGGAGCCTCAGCTTCTCGGGAGCAAATGGGTTATACATTTGATGCTTTAAAGACGTATGTTCCTCAGATGGTTGAATTGCTTGTTGATTGTGTAAGGAACCCAGCCTTCTTGGATTGGGAGGTCAATGAAGAGCTTCGCAAGGTGAAAGCAGAGCTTGGAGAACTCTCAAACAATTCTCAGGGCTTGCTTTTGGAAGCAATTCACTCGGCTGGTTATTCTGGTGCATTGGCTTATCCTCTTTTGGCTCTTGAAGCAGCACTGAACAGATTGGATGGCCCCAGTTTAGAGGAATTTGTTGCTGAGCATTACACTGCACGTAGAGTGGTACTTGCAGCATCTGGGGTTGATCATGAAGAACTTCTATCTGTTGCTGAGCCACTTCTCTCTGATCTGCCAAATGTTCCTCGTCCTGAAGAACCAAAATCTAAGTATGTTGGGGGTGATTTTCGACGTCAAGGTGAATCAGGGGATACACATGTTGCTATCGCTTTTGAAGTGGCTGGTGGATGGCAAAATGAGAAAGATGCTATAGTTTTGACGGTTCTTCAGATGCTTATGGGAGGAGGTGGGTCATTCTCAGCAGGGGGTCCTGGGAAAGGGATGCACTCAAGGCTATATCTTCGTGTGTTGAATGAATATCAACAGATTCAATCTTTTTCTGCATTCAACAGTATCTTCAACAATACAGGACTGTTTGGCATTTATGCAAGCACTAGCTCCGATTTTGTGGCAAAAGCTGTGGATATTGCAGCCAAAGAACTAATAGCAATTGCATCTCCTGGACTAGTTTCACAGGTACAGCTTGACCGTGCCAAAAAATCCACAAAGTCAGCAGTTCTAATGAACCTGGAATCTAGAGTGATTGCTTCAGAAGACATAGGAAGACAGGTTTTGACTTATGGAGAAAGGAAGCCAGTGGAGCTGTTCTTGAAGGCTGTAGATGAAATCACTTTGAATGATATCACTAAAATTGCCCAGAAGATCATTTCCTCACCTTTGACCATGGCATCATATGGGGATGTTCTTAATGTCCCTAGTTATGAATCTGTTAACAGAAAGTTCCATGCAAAATGA 3300 0.4276 MISFSISRFPSTSPSFSSQPSATVTESFRLDLYTTSSNTPSHSFEHKVPSDVKVGNFTRKSGRRVMGMNPIEIGDGGFGKNKKKGKEKIYWVCSNCGYTAGQWWGVCRSCTVAGTMKEFHESKTSEVHSKVNGFMVLEEDGVGSWLPQQQGELRPLRLIDINRGLNHQHWRIPLSGSFGNEVSRVLGGGLVPGSLNLVGGDPGVGKSTLLLQIAAMISEGGNDGEVYPVVYVSGEESVEQIGNRADRLMIESDIYVYSSNDIEDILKKVRDISPRALVVDSIQTVYLKGIMGSPGGIIQVKECTSALLRFAKTTNIPVLLIGHVNKSGDIAGPRVLEHIVDVVLYMEGEKCSSHRMLRAVKNRFGSTDELGIFEMSHSGLQAVSNASEMFLSEQHLDSEILAGMAVAVIMDGSRTFLIEIQALCLSGSTGSRQVNGIHASRADMIISVLIKQAGLRLRENKCSVSRVRSVHLRSIWRRGVMFNFEFITHLHRRFHRRREVKPRKAVYLNVVSGFILTETAGDLAVAASICSSFLELPIPNDIAFIGEIGLGGELRMVPRMEKRIHTVAKLGYRMCVVPKAAEKALGTESLENMKVVGCRNLKDVINTGHGGSLGATRLATSAVVASKASSGGLFSWLTGERSSSFPPLDTPLGGIAFPDPLPDHVEPSKTKITTLSNGLKIASETSPNPAASIGLYLDCGSIYETPLSSGASHLLERMAFKSTTNRSHFRIVREVEAIGGNIGASASREQMGYTFDALKTYVPQMVELLVDCVRNPAFLDWEVNEELRKVKAELGELSNNSQGLLLEAIHSAGYSGALAYPLLALEAALNRLDGPSLEEFVAEHYTARRVVLAASGVDHEELLSVAEPLLSDLPNVPRPEEPKSKYVGGDFRRQGESGDTHVAIAFEVAGGWQNEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSSDFVAKAVDIAAKELIAIASPGLVSQVQLDRAKKSTKSAVLMNLESRVIASEDIGRQVLTYGERKPVELFLKAVDEITLNDITKIAQKIISSPLTMASYGDVLNVPSYESVNRKFHAK 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0161 1099 SMART AAA_5 192 350 IPR003593 -
Lal18g0161 1099 Gene3D - 181 388 IPR027417 -
Lal18g0161 1099 ProSiteProfiles RecA family profile 1. 171 324 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Lal18g0161 1099 Pfam Insulinase (Peptidase family M16) 681 823 IPR011765 -
Lal18g0161 1099 Gene3D - 402 611 IPR014721 -
Lal18g0161 1099 SUPERFAMILY LuxS/MPP-like metallohydrolase 669 879 IPR011249 GO:0046872
Lal18g0161 1099 PANTHER METALLOPROTEASE 610 1098 - -
Lal18g0161 1099 SUPERFAMILY LuxS/MPP-like metallohydrolase 890 1090 IPR011249 GO:0046872
Lal18g0161 1099 SUPERFAMILY Ribosomal protein S5 domain 2-like 475 606 IPR020568 -
Lal18g0161 1099 Pfam AAA domain 185 328 - -
Lal18g0161 1099 Gene3D - 879 1098 - -
Lal18g0161 1099 ProSitePatterns Insulinase family, zinc-binding region signature. 700 723 IPR001431 GO:0004222|GO:0006508
Lal18g0161 1099 PRINTS DNA repair protein radA signature 93 117 - -
Lal18g0161 1099 PRINTS DNA repair protein radA signature 184 212 - -
Lal18g0161 1099 PRINTS DNA repair protein radA signature 280 304 - -
Lal18g0161 1099 PRINTS DNA repair protein radA signature 319 347 - -
Lal18g0161 1099 PRINTS DNA repair protein radA signature 354 380 - -
Lal18g0161 1099 PRINTS DNA repair protein radA signature 429 452 - -
Lal18g0161 1099 MobiDBLite consensus disorder prediction 1 21 - -
Lal18g0161 1099 Pfam Peptidase M16 inactive domain 836 1015 IPR007863 -
Lal18g0161 1099 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 610 1098 IPR037715 GO:0006627
Lal18g0161 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 375 IPR027417 -
Lal18g0161 1099 Pfam Rubredoxin metal binding domain 91 118 IPR041166 -
Lal18g0161 1099 Gene3D - 660 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0161 Lal-Chr18 1291436 1309996 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0161 K01412 - gmx:100794691 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0161 18 1291436 1309996 Lal18g0161 18 1291436 1309996 ECH
Lal25g0310 25 2128666 2137082 Lal18g0161 18 1291436 1309996 PCT
Lal18g0161 18 1291436 1309996 Lal25g0310 25 2128666 2137082 PCT