Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0114 ATGGCCGTTTCTACATTAGCTTTATATGCAAGTTCACCAAGTAGTGTGTGTTCTACACCTCACCCATGTCAGATTAACGCACATGCCTCCTATGATTTCGAATTGGGTTCTCGATCTTCGTCGCCGCCGTCGCAAACGGCGGCTTCGACATCACAGAAGGCTATGGTAATGGGTGGGTTGTCTTGTCTGTTTTCCTCATCGGCGGTTACAAAGCATGCGACGTTGTCATCGAGCTTTTCGGGTCCGATGGGTGATGAATTGGGGTCTGAATTGAAGGAATATACCTGCAAATTCATTGGGTCTTCATCATGGAAAAGAGATCATCATCATAGCCCTGTTTCTGTTTTCCATGGACCCGTTTCGTGTAGCAGCAGCAGCAGCACCCTTGGTTCTTCAAGGAGTTTGTTTGATGGGTTTGTGAGGAATGCTTTGGGTTCATGTTTGGATTATGATTCTCCAAGTTTCAAGGTTGATGATGGTTTAGATGAGTTGACCTTCAAATTGGAGGATACTTCTGTGGGGGGTGGTTTTGAACAATATGCTAAGAAGTTGCTTCTTGATGCCCAGTTGAGGCATAAGATCTTCTGCGAAGAGTTTGTAATCAAGGCTTTTTGTGAAGCTGAGAAAGCTCACAGAGGGCAGATGCGTGCAAGTGGGGATCCGTATTTGCAGCATTGTTTGGAAACTGCTGTGCTACTTGCTTTGATTGGTGCCAATTCCACAGTAGTAGCTGCAGGACTTTTGCATGATACACTTGATGATTCTTTTCTGACTTATGATTACATATTTGAGACGTTTGGCGCTGGGGTTGCTGATTTAGTTGAAGGGGTTTCCAAACTGAGTCACTTAAGTAAGCTTGCTCGAGAAAATAATACAGCATGCAAATCGGTTGAGGCAGACCGCCTGCATACCATGTTCCTTGCCATGGCAGATGCAAGAGCTGTCCTCATTAAATTGGCAGATCGACTGCATAATATGATGACACTAGATGCATTGCCGTTGGCCAAGCAACAGAGGTTTGCAAAGGAGACTTTGGAAATTTTTGCTCCTCTGGCCAATCGCTTAGGAATATCTAATTGGAAGGAACAATTAGAAAATTTGTGTTTTAAGCATCTCAACCCAGAGCAGCATGAGGAGCTTTCCTCGAAGCTTGTGAACTCGTATGATGATGCAATGATTACTTCTGCAATAGAGAGACTAGAGCAAGCACTTAAAGATGAAGGCATATCTTATCACGTCCTCTCTGGGCGGCATAAGAGCAAGTATAGCGTTTATTGCAAAATGCTGAAGAAGAAGCTATCCATAGATGACATCCATGACATTTATGGGTTGCGCTTGATTGTTGACAAGGAGGAAGACTGTTACAAAGCCTTGACAGTTGTTCACCAGTTATGGTGTGAAGTACCTGGAAAGATGAAAGATTACATATGTCGCCCCAAGTTCAATGGGTATCAATCTTTGCATACTGTAGTGACTGGTGAAGGCAAAGTGCCCCTTGAAGTGCAAATTCGGACAAAAGATATGCATTTACAAGCAGAATTTGGATTTGCTGCTCATTGGAGATACAAGGAAGATGACTGTCAGCATTCTTCATTTGTACTTCAAATGGTTGAGTGGGCTCGATGGGTCGTCACCTGGCAGTGCGAGGCAATGAGTAAAGATCGTTCATCTGTTGGGTATCCTTATTCAATCAAGCCACCATGCAAGTTCCCTTCCCATGCAGATGATTGCCCATATTCTTATAAGCCTGATTGTGGTCAGGATGGGCCTGTGTTTGTTATTATGATCGAGAGTGATAAGATGTCTGTCCAAGAATTTTGCGCCAACGCAACAGTGATGGATTTGTTGGAAAGAGCCGGGCGAGGAAGCTCGAGGTTGAGAACATATAGGTTCCCAGTGAAGGAAGAATTGAGGCCAAGGTTGAATCATGTTCCCATAAGTGATCCCAAATGCAAGTTGAAGATGGGAGATGTGGTGGAGCTTACACCAGCCATACCGGACAAGTCCTTAACAGAATACAGGGAAGAAATTCGGCGAATGTATGATCGAGGGCTAACCGTATCGACCACAGGACCTTCTGCAAGCACCATGGTTGGCTCAAGAGGCTAA 2109 0.4452 MAVSTLALYASSPSSVCSTPHPCQINAHASYDFELGSRSSSPPSQTAASTSQKAMVMGGLSCLFSSSAVTKHATLSSSFSGPMGDELGSELKEYTCKFIGSSSWKRDHHHSPVSVFHGPVSCSSSSSTLGSSRSLFDGFVRNALGSCLDYDSPSFKVDDGLDELTFKLEDTSVGGGFEQYAKKLLLDAQLRHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTLDDSFLTYDYIFETFGAGVADLVEGVSKLSHLSKLARENNTACKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLAKQQRFAKETLEIFAPLANRLGISNWKEQLENLCFKHLNPEQHEELSSKLVNSYDDAMITSAIERLEQALKDEGISYHVLSGRHKSKYSVYCKMLKKKLSIDDIHDIYGLRLIVDKEEDCYKALTVVHQLWCEVPGKMKDYICRPKFNGYQSLHTVVTGEGKVPLEVQIRTKDMHLQAEFGFAAHWRYKEDDCQHSSFVLQMVEWARWVVTWQCEAMSKDRSSVGYPYSIKPPCKFPSHADDCPYSYKPDCGQDGPVFVIMIESDKMSVQEFCANATVMDLLERAGRGSSRLRTYRFPVKEELRPRLNHVPISDPKCKLKMGDVVELTPAIPDKSLTEYREEIRRMYDRGLTVSTTGPSASTMVGSRG 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0114 702 PANTHER - 1 700 - -
Lal18g0114 702 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 1 700 - -
Lal18g0114 702 SUPERFAMILY HD-domain/PDEase-like 188 373 - -
Lal18g0114 702 Gene3D Hypothetical protein af1432 181 373 - -
Lal18g0114 702 SMART hd_13 218 335 IPR003607 -
Lal18g0114 702 CDD NT_Rel-Spo_like 396 514 IPR007685 GO:0015969
Lal18g0114 702 Pfam HD domain 207 357 - -
Lal18g0114 702 ProSiteProfiles S4 RNA-binding domain profile. 640 676 - -
Lal18g0114 702 Pfam Region found in RelA / SpoT proteins 416 525 IPR007685 GO:0015969
Lal18g0114 702 SUPERFAMILY Nucleotidyltransferase 363 554 IPR043519 -
Lal18g0114 702 CDD HDc 220 348 IPR003607 -
Lal18g0114 702 SMART RelA_SpoT_2 416 526 IPR007685 GO:0015969
Lal18g0114 702 Gene3D Beta Polymerase, domain 2 377 506 IPR043519 -
Lal18g0114 702 ProSiteProfiles HD domain profile. 222 326 IPR006674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0114 Lal-Chr18 915913 922006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0114 215 523 EF-hand Containing Proteins AT3G17470 29.499 5.07e-40 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0114 K00951 - gmx:100787301 1128.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0114 18 915913 922006 Lal18g0114 18 915913 922006 ECH
Lal20g0984 20 12914387 12919552 Lal18g0114 18 915913 922006 LSH