Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0920 AAATTAAAGTATTATATAACAATGGCAACACGGTCATCTGAGCCAGCCACAGAAGAACCTAAGAAGCTTATCAGAGATGAGGTTACTACTGAGTTGAATGAACATAGTTTGCCTCCATTTGACCCTGATGTGCAGAGGATCATATATGGCTTCACTTACTTTAAGCTCAACAACTTCGACAAAAATCCTGAGCTTTACAAAGAACTTGCTCTCCACCAATCCCCAAGGTTTTTGATATTTGCTTGTTCTGACTCTCGAGTGAGTCCTGATGTTATCCTAAACTTTCAACCTGGAGAAGCTTTCTCGGCCCGCAACATTGCTAACATGGTTCCTACATATAATCAGAGGGACAATGGAGTTGGTGCAATAATTGAGTATGCTATCGAAGCTCTTAAGGTATCAAACATTCTGATAATTGGACATAGTAAGTGTGGTGGAATAAAAAGGCTCATGAGTCACCCAGAGGATGGTACTCCTGACTATCATACATGGAAGAATGATTTCAAAATAGAAGTTCGTCAACCAGATATGTGTACTTCTCGGATTAAATTCCACACTGCATGCGGAAGATCTATATCCATTTCTAATTATGCACTGCAACGTGCTAGAAGCCTTCTGGGAGAACCACACCTTGGAGATTTCTTTGATGGAGGGGATGTCAGTGACTCAATCTTTTCTCTGAAATAG 687 0.4047 KLKYYITMATRSSEPATEEPKKLIRDEVTTELNEHSLPPFDPDVQRIIYGFTYFKLNNFDKNPELYKELALHQSPRFLIFACSDSRVSPDVILNFQPGEAFSARNIANMVPTYNQRDNGVGAIIEYAIEALKVSNILIIGHSKCGGIKRLMSHPEDGTPDYHTWKNDFKIEVRQPDMCTSRIKFHTACGRSISISNYALQRARSLLGEPHLGDFFDGGDVSDSIFSLK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0920 228 SUPERFAMILY beta-carbonic anhydrase, cab 37 164 IPR036874 GO:0004089|GO:0008270
Lal17g0920 228 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 82 89 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lal17g0920 228 PANTHER CARBONIC ANHYDRASE 26 170 IPR001765 GO:0004089|GO:0008270
Lal17g0920 228 Pfam BRCA2 repeat 184 208 IPR002093 -
Lal17g0920 228 Gene3D Carbonic anhydrase 28 196 IPR036874 GO:0004089|GO:0008270
Lal17g0920 228 PANTHER CARBONIC ANHYDRASE 26 170 - -
Lal17g0920 228 ProSiteProfiles BRCA2 repeat profile. 177 211 IPR002093 -
Lal17g0920 228 Pfam Carbonic anhydrase 78 169 IPR001765 GO:0004089|GO:0008270
Lal17g0920 228 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 125 145 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lal17g0920 228 SMART Pro_CA_2 70 207 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0920 Lal-Chr17 7270831 7272888 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0920 K01673 - gmx:547671 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0488 15 3329231 3342192 Lal17g0920 17 7270831 7272888 ECH
Lal17g0920 17 7270831 7272888 Lal17g0920 17 7270831 7272888 ECH