Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0729 ATGACGAAAATGAGGAAGCTGAATCGAACCGATGCTCACCGAATTTCCATGCTCAGAACGATGGTCTCGCAGCTAGTGAAGCATGAGCGTATCGAAACTACTGTTGCCAAGGCTAAAGAGCTCAGAAGGCAGGCAGATAGAATGGTAACACTTGGAAAGGAGGGAACCCTGTGTGCTGCAAAGCGTGCTGCTGCTTTTGTTCGAGGAGATGATGTCATTCACAAGCTGTTTACAGAACTGGCTTATCGGTACAAGGATAGAGCAGGTGGATACACCAGAATGCTTCGGACCCGTATACGTGTGGGTGATGCTGCGCCAATGGCCTATATCGAGTTCATTGACAGAGAAAATGAGCTAAGGGAGCCAAAGCCACCGACACCTCAACCACCACAGAGAGTACCCCTTGATCCCTGGGCTCGATCTCGTCTCTGCCAGCGGTTTGCATCTCCTAAAAAGGAAAAATCTGAAAGTGATTTGTGA 480 0.4896 MTKMRKLNRTDAHRISMLRTMVSQLVKHERIETTVAKAKELRRQADRMVTLGKEGTLCAAKRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELREPKPPTPQPPQRVPLDPWARSRLCQRFASPKKEKSESDL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0729 159 MobiDBLite consensus disorder prediction 116 138 - -
Lal17g0729 159 Pfam Ribosomal protein L17 17 113 IPR000456 GO:0003735|GO:0005840|GO:0006412
Lal17g0729 159 PANTHER RIBOSOMAL PROTEIN L17 1 157 IPR000456 GO:0003735|GO:0005840|GO:0006412
Lal17g0729 159 ProSitePatterns Ribosomal protein L17 signature. 31 53 IPR000456 GO:0003735|GO:0005840|GO:0006412
Lal17g0729 159 PANTHER BNAA09G06940D PROTEIN 1 157 - -
Lal17g0729 159 TIGRFAM L17: ribosomal protein bL17 4 114 IPR000456 GO:0003735|GO:0005840|GO:0006412
Lal17g0729 159 Gene3D Ribosomal protein L17 1 113 IPR036373 GO:0003735|GO:0005840|GO:0006412
Lal17g0729 159 Hamap 50S ribosomal protein L17 [rplQ]. 2 113 IPR000456 GO:0003735|GO:0005840|GO:0006412
Lal17g0729 159 SUPERFAMILY Prokaryotic ribosomal protein L17 3 116 IPR036373 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0729 Lal-Chr17 5171055 5174225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0729 K02879 - fve:101302391 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0729 17 5171055 5174225 Lal17g0729 17 5171055 5174225 ECH
Lal17g0729 17 5171055 5174225 Lal4g0620 4 4580159 4584120 LSH