Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0242 ATGAGATTCAAAAAGGGAAGTAAAGTGGAAGTCCTTGCCAATACTAAGGAATTTTGTGTGGAATGGCGTTGTGCTCGTATTATCTCTGGTAACGGGCACACTTACAGTGTCCAGTATGATGGTTCTAGAATGAAGAATGAGGCTGGTGTGGAGAGAGTTCCAAGGAAGGCCATCAGACCATGCCCTCCTCTTATTAAAGCCGTCAAGGGATGGGAGGCTAATGATGTTGTGGAGGTTTATGACGATGGTTCTTGGATAGCGGCTATTGTATTGAAGTTAATAGGTGGAGACTTCTATTTGGTAAGGTTGTGCATATCATGCAAGGAGTTAGAGGTCCAGAAAATAAACACGAGGATACGCCAGTCTTGGCATAATGGTGAATGGGTCATCAAGCCAGTGGTATCCGACAGGTCGGGCAATTCTGGAGTTGGGAAGCCTTACTGGACATTGATTTCAAACAGTTGTAAGGTGATACCTGAAGTTCAACATGTCAGTACTGAAATAAGTCGGCAAGGCAGTAATGACTGTTTAATAGGATTGGATGCCAGTGATCGCTGGGAGCCTCGTCCAGCCTCATCTACAACATTGAAGCGAGTGTCTTCTTACTGTTCTACTCCTGTTGATGCTTATCCCAGAAAAATCAGGGTTGTTACGAATAAGGGTGAACATGAAAGATTCAAAGCTGTGTCCACAGCCCCCTTGATGGAAAAGGTAGATGCCTTTGCTTACCCACAAAATGATATGGGTGAAAAATGCATGCATGCTTCCTTTAATGGTTCCAACCAATATCATGTAATGGGGAAAGAAAACCATTCTAAAGTTTCAAATCATTTCCTTGAAAAAATTGAAGAGTCAGTTTATTCATGTAGTGATGTGAGTTCAGTCGGGAGTTGTAGTGTGATAAGTAATAGTACAAATAAATTTTCCAGTGGTATGTTAACAGGGACTTGCCAAGATGGAGATGCTCTTTCTAGTAATGCAGAGTCTCTAGATACTACTAGGGATAAAGGATGCTCCATTTCTCCAAGAGAAGTTACACCAGAAAAAATTCATAGGTTAGAGTTGCATGCTTATCGCAGGACCCTAGAGGTAATGTATGCTTCTAGTCGTTTAAGTTGGAAACAAGAAGAATTATTGACTGATCTTCGTATTTTGCTCCATATTTCAAATGCTGAACATTTAATGGAGTTAAAGAAATTAATTTCAGCTTGTCCGCATCTTTAA 1224 0.4093 MRFKKGSKVEVLANTKEFCVEWRCARIISGNGHTYSVQYDGSRMKNEAGVERVPRKAIRPCPPLIKAVKGWEANDVVEVYDDGSWIAAIVLKLIGGDFYLVRLCISCKELEVQKINTRIRQSWHNGEWVIKPVVSDRSGNSGVGKPYWTLISNSCKVIPEVQHVSTEISRQGSNDCLIGLDASDRWEPRPASSTTLKRVSSYCSTPVDAYPRKIRVVTNKGEHERFKAVSTAPLMEKVDAFAYPQNDMGEKCMHASFNGSNQYHVMGKENHSKVSNHFLEKIEESVYSCSDVSSVGSCSVISNSTNKFSSGMLTGTCQDGDALSSNAESLDTTRDKGCSISPREVTPEKIHRLELHAYRRTLEVMYASSRLSWKQEELLTDLRILLHISNAEHLMELKKLISACPHL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0242 407 SMART agenet_At_2 69 125 IPR014002 -
Lal17g0242 407 SMART agenet_At_2 1 66 IPR014002 -
Lal17g0242 407 Pfam ENT domain 348 400 IPR005491 -
Lal17g0242 407 Pfam Agenet domain 6 63 IPR008395 -
Lal17g0242 407 PANTHER PLANT TUDOR-LIKE RNA-BINDING PROTEIN-RELATED 1 275 - -
Lal17g0242 407 SUPERFAMILY ENT-like 349 402 IPR036142 -
Lal17g0242 407 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 1 275 - -
Lal17g0242 407 Gene3D ENT domain 340 403 IPR036142 -
Lal17g0242 407 SMART ENT_2 346 405 IPR005491 -
Lal17g0242 407 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 346 407 IPR005491 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0242 Lal-Chr17 1502317 1506387 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0242 - - lang:109327965 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0242 17 1502317 1506387 Lal17g0242 17 1502317 1506387 ECH
Lal17g0242 17 1502317 1506387 Lal21g0345 21 2347570 2358271 LSH
Lal17g0242 17 1502317 1506387 Lal4g0226 4 1425495 1429765 LSH