Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1791 ATGGGAACTTCAAATAATGGTGATTATGTAGCTGTTGATGATTCACCATCTTCTGCAATGGAAAACAATAATGTGAGGAAAGTTTCTGTTCTTCCACTTGTATTTCTAATATTCTATGAGGTTTCTGGTGGACCCTTTGGTGTTGAGGATACTGTACATGCAGCAGGTCCTCTTTTAGCACTTTTAGGGTTCTTGATTTTTCCATTGATTTGGAGTGTCCCTGAGGCTCTGATTACTGCAGAAATGGGTACGATGTTTCCTGAAAATGGTGGTTATGTGGTTTGGGTTTCATCTGCATTAGGCCCCTTTTGGGGGTTTCAGCAAGGTTGGATGAAATGGTTAAGTGGTGTTATTGATAATGCTTTGTACCCAGTTCTGTTTCTTGATTATCTTAAATCGGGGTTTCCGGCATTAGGTGGAGGGGTTCCTAGAGCAATTTCGTCGTGGGGTTTGACCTTGTTTCTCACTTATTTGAACTATAGGGGTTTGCATATTGTAGGGTGGGTTGCTGTTCTTATAGGGGTTTTCTCCCTTCTACCTTTTGTGGTTATGGGACTCTTGTCAATTCCCGACTTGAAACCTTCGAGATGGTATGTGACGGATTTGGATAATGTCGACTGGAATTTGTATTTGAATACTCTATTTTGGAATCTTAATTATTGGGATTCGATTAGTACTCTTTCTGGAGAAGTGGAAAATCCGAAGAAAACCCTTCCCAAGGCTCTTTTTTATGCTCTGATCCTAGTTATTGTAGGGTATTTCTTTCCTCTTCTAATTGGCACCGGCGCTGTTCCCCTCGATCAGAAGTTGTGGACTGATGGGTACTTCTCGGATATCGCTATGATTGTTGGAGGAGTGTGGCTGAGATGGTGGCTTCAGGCTGCTGCTGCGATGTCAAATATGGGAATGTTTGTTGCTGAAATGAGCAGTGATGCTTTTCAGCTTCAAGGCATGGCTGAGAGGGGATTGTTGCCCGAGTTCTTCGGCAAGAGATCTCGCTATGGAACCCCTCTTATAGGAATACTCTTTTCAGCCTCGGGTGTAATTTTACTATCATGGCTGAGCTTTCAAGAAATTGTAGCTGCCGAAAATTTCTTGTACTGTTTCGGTATGATTTTGGAGTTCATTGCTTTCATATGGTTGCGGATCAAACAACCCTCCGTGCCTCGGCCGTACAAGGTACCGGGGGGAACAGCTGGAGCAATTATTATGTGCATTCCTCCAACAATATTGATTTTTGTGGTAATGGCTTTCTCTACCTTAAAAGTAGTGATTATAAGCCTCATTGCTATGGCGATTGGCCTTGTGATGCATCCTTGTCTTAAATTTCTCGAGAGAAAGAGATTCATGAAGTTCTCGGTCAGTCCCCGTCTCGAACATTTTGACAATGAGGAGAGCACTCATCCTCTGGTAAATTAA 1419 0.4264 MGTSNNGDYVAVDDSPSSAMENNNVRKVSVLPLVFLIFYEVSGGPFGVEDTVHAAGPLLALLGFLIFPLIWSVPEALITAEMGTMFPENGGYVVWVSSALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKSGFPALGGGVPRAISSWGLTLFLTYLNYRGLHIVGWVAVLIGVFSLLPFVVMGLLSIPDLKPSRWYVTDLDNVDWNLYLNTLFWNLNYWDSISTLSGEVENPKKTLPKALFYALILVIVGYFFPLLIGTGAVPLDQKLWTDGYFSDIAMIVGGVWLRWWLQAAAAMSNMGMFVAEMSSDAFQLQGMAERGLLPEFFGKRSRYGTPLIGILFSASGVILLSWLSFQEIVAAENFLYCFGMILEFIAFIWLRIKQPSVPRPYKVPGGTAGAIIMCIPPTILIFVVMAFSTLKVVIISLIAMAIGLVMHPCLKFLERKRFMKFSVSPRLEHFDNEESTHPLVN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1791 472 PIRSF AA_transporter 6 464 - -
Lal16g1791 472 PANTHER POLYAMINE TRANSPORTER PUT1 1 463 - -
Lal16g1791 472 Pfam Amino acid permease 35 430 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lal16g1791 472 Gene3D Amino acid/polyamine transporter I 24 453 - -
Lal16g1791 472 PANTHER POLYAMINE TRANSPORTER PUT1 1 463 IPR044566 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1791 Lal-Chr16 17023215 17024633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1791 10 468 Organic Solute Cotransporters AT1G31830 73.913 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1791 - - gmx:100816567 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1791 16 17023215 17024633 Lal16g1791 16 17023215 17024633 ECH
Lal15g0354 15 2388218 2391707 Lal16g1791 16 17023215 17024633 PCT
Lal16g1791 16 17023215 17024633 Lal15g0354 15 2388218 2391707 PCT