Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0354 ATGAAATTGATGGATGAATCAATAAAAGAAGTGAAGGGTGAAGGAAAATCAACAGAGCAGGCAGTGGAACAAGCTTCTGTTGAAGACTCATGTTCTAATGTTCAAAACAAAGAGAGAGCGAGGACTACAGCTAATAGACAAGATTCCATTGCAATGGGGGAGTTCAACGGTGATGGGTATGTTACTGTTGGTGAAATACCCTCCCCCAGGGCAAATCACATGAAGAAAGTTTCACTTCTTCCTCTTGTGTTTCTCATCTTCTATGAGGTATCGGGAGGGCCTTTTGGCATCGAGGATACTGTGAATGCAGCAGGTCCTCTTTTAGCCTTGCTTGGCTTCTTGGTTTTCCCATTGATATGGAGTATTCCTGAAGCTTTGATCACTGCTGAGATGGGTACCATGTTTCCTGAAAATAGTGGTTATGTGGTTTGGGTTTCTTCTGCTTTGGGTCCATATTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTAAGTGGAGTGATAGACAATGCTTTATACCCAGTTCTGTTTCTTGACTATCTTAAGTCAGGAATTCCAGCTTTAGGTGGTGGCTTACCTAGAGTTATTGCAACTTGGGGCTTGACCATTCTTCTCACTTACATGAACTACAGGGGTTTAACCATTGTCGGATTTTTCGCCGTCTTCTTAGGGGTTTTCTCACTCATCCCTTTTGTGGTTATGGGGTTCTTAGCAATTCCTGACTTGAAACCTAAAAGATGGTCTGTGATAAATCTGAATGATGTTGATTGGAGCCTCTATTTGAATACTCTATTTTGGAATCTTAATTACTGGGACTCCATAAGTACTCTTGCAGGAGAAGTTGATAATCCGAAGAAAACTCTTCCAAAAGCATTGTTTTATGCCTTGATCTTGGTAGTTCTGGCCTATTTCTTTCCTCTTCTAATTGGTACTGGTGTTGTTCCTCTCAAGCGTGAGCTGTGGACTGACGGGTACCTCTCAGATATTGCTATGATTGTCGGGGGAGTGTGGTTGAGATGGTGGCTTCAGGGTGCTGCTGCGATGTCAAATATGGGAATGTTTGTCGCCGAAATGAGCAGCGACTCTTTCATGCTTCTAGGGATGGCTGAGAGGGGAATGCTGCCTGAGTTCTTCATGAAGAGGTCTCGCCATGGGACCCCTCTTATAGGAATACTTTTTTCGGCCTTTGGTGTAATCTTACTCTCATGGCTAAGCTTTCAAGAAATCGTAGCTGCTGAAAATTTCTTGTACTGTTTTGGAATGATTTTGGAGTTCATTGCGTTCATATTGATGAGGATCAAACACCCGAATTTGTCTCGGCCTTACAAAATACCAGGCGGGACCGCAGGAGCAATTGTCATGTGTACCCCTCCCACAATATTGATCTGTATTGTATTGGTTCTCTCCTCCCTCAAAGTAATGATTATAAGCCTCATTGCTGTGGCTATTGGCCTTGTGATGCAGCCTTGTCTCAAATATGTTGAGAAAAAGAGATGGATGAAGTTCTCACATAGTTCTGAGCTCCCACCTTTTGAAAATGAAGAGAGCACTCACTCTTTGGTGGATTGA 1566 0.431 MKLMDESIKEVKGEGKSTEQAVEQASVEDSCSNVQNKERARTTANRQDSIAMGEFNGDGYVTVGEIPSPRANHMKKVSLLPLVFLIFYEVSGGPFGIEDTVNAAGPLLALLGFLVFPLIWSIPEALITAEMGTMFPENSGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSGIPALGGGLPRVIATWGLTILLTYMNYRGLTIVGFFAVFLGVFSLIPFVVMGFLAIPDLKPKRWSVINLNDVDWSLYLNTLFWNLNYWDSISTLAGEVDNPKKTLPKALFYALILVVLAYFFPLLIGTGVVPLKRELWTDGYLSDIAMIVGGVWLRWWLQGAAAMSNMGMFVAEMSSDSFMLLGMAERGMLPEFFMKRSRHGTPLIGILFSAFGVILLSWLSFQEIVAAENFLYCFGMILEFIAFILMRIKHPNLSRPYKIPGGTAGAIVMCTPPTILICIVLVLSSLKVMIISLIAVAIGLVMQPCLKYVEKKRWMKFSHSSELPPFENEESTHSLVD 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0354 521 Pfam Amino acid permease 82 482 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lal15g0354 521 MobiDBLite consensus disorder prediction 19 43 - -
Lal15g0354 521 PANTHER POLYAMINE TRANSPORTER PUT1 36 514 IPR044566 GO:0022857
Lal15g0354 521 PIRSF AA_transporter 60 519 - -
Lal15g0354 521 MobiDBLite consensus disorder prediction 1 43 - -
Lal15g0354 521 MobiDBLite consensus disorder prediction 1 17 - -
Lal15g0354 521 Gene3D Amino acid/polyamine transporter I 73 506 - -
Lal15g0354 521 PANTHER POLYAMINE TRANSPORTER PUT1 36 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0354 Lal-Chr15 2388218 2391707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0354 54 517 Organic Solute Cotransporters AT1G31830 72.281 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0354 - - aip:107642412 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0354 15 2388218 2391707 Lal15g0354 15 2388218 2391707 ECH
Lal15g0354 15 2388218 2391707 Lal16g1791 16 17023215 17024633 PCT
Lal16g1791 16 17023215 17024633 Lal15g0354 15 2388218 2391707 PCT