Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1780 ATGGAAGAGAATGGGGAAAGGAATAGCATAAATGGTAGCTTCAAGTTAGGAGTGAAAGATGTAAAAATTCACACAGTGGTTGAGCTTAGTAGTGTAGACACACACAATCTTCTTGTAGATTGTAATAGTGATGTTGATGTTGAAGAAGAAGATAGAGAGAAAGAGAAAAAACCTTTCACAAAATCTCTATCACAAAGGCAAATGAAGTCTCTTGTTGCTATTTGTGACACTCTCTTACCTTCCATTAAAGACCACTCACTTGTTGTTGGGTCCTCTCATCAATCTGTGGCTAATTTCTACCAAACTTCAGCATCCATGGCTGGAACACCTCAGCTTATTGGGACATTGATAAGTGAGAAATTGCAACACCCAAATACATGGTTATTGAGAATAACATTATGGCTATTATCTACATGGTTTGGAACATTGATACTATGTGGCATTTCAAGTTTGTCATTGAAGTTCCCTTTCTTTCATAATTTCTCTAAACTTTCTCTTCAAAAAAGACAACAAATTATGTTATCTTGGTCTCTCAGTTACTTTAATCTCCTTAGGATGTTCTTCAGAAGTGTCAAGCTTCTCACTCTACTTCTCTTCTTTACTCAGCAATATTGTGGTTATGATGACCGCCATAACCGCATCACACCACAATTGTGGTGTGACGTGACTGCATCGCGTTACAACATAACTGCATCGGGCCGTAAAGCAAATGAATCAGACCATATTTGGACCGCATTAGGCCGCCTAGATGAAGCACAAAACAACCCATCATGGAGTGCAATTGGATATAGTGGACCTGATCCACAGTTCAAACCACAATTGAAGAACAATTTTTTACATAAATCATCAAAAGGAGAAGAACAAGATGAAAAGAAAGACGACGATGATGATGATGACGATGACGAGATTATTGGACCTCTTAACAAAGGCATTGTCCATCTAAATCAGCCACCAAATATCATAGCAGACACACTAAGACAATTTGGATTCTTTGTATCTGTGACTCAAAGAAAGCCTAAAGTTTCTTATAACTTGTCATATCCTTCTCTAGTTATCCAATGTGATGCTGTTGTTGTTGGTTCTGGCTCAGGAGGTGGTGTTGTTGCTGGAGTTTTATCAGAAGCTGGTTATAAAGTTCTTGTCTTAGAGAAAGGAAATTATTCTGCTAGGAACAATCTTTCCCTTCTTGAAGGACCAACTTTTGATCAAATGTACCTCTCAAATGGGTTTCTTGCAACACAAGATATGTCTCTACTATTGCTTGCAGGGTCCACAGTTGGTGGAGGTTCTGCTATAAACTGGTCAGCATGCATCAAAACTCCTAAGCATGTTTGCAAGGAATGGTGTGATAGTTATGAACTAGAGTTATTTGAGAGTGAGGTATATGAAGAAGCTATGAATGTTGTGTGTGAGAAAATGGGAGTTCAATCTGATATTGAAGAGGAAGGATTCAACAATGAAATATTAAGAAAAGGGTGTGAAGAAATGGGTTATCCTGTTAGTAATATTCCAAGGAATGCACCAAAAGATCATTACTGTGGTTGGTGTTGCATGGGTTGTAAAGATGGGAAGAAAAAAGGTACATCAGAGACATGGCTTGTGGATTTGGTTAAGTCAGGTAATGGTGCAATTCTACCTAGATGTGAGGCTATTCAAGTTTTGCATAAGAGAAAGAAAGGAAGTGATAGAAAAATAGCAAGTGGAGTTGCTTTTGAAATTGAATACAAAGGGAGTAAAGAGATTTGTGTTGTGGAGTCAAAGGTCACAATTGTTGCTTGTGGAGCACTTAGTACTCCATCATTGCTTAAAAGAAGTGGTTTGAAGAATGAAAACATTGGGAGATACTTGCATCTTCACCCTACAACAATGGCTTGGGGCTATTTCCCGGACTCGCCTTCACCCGAGGTTTGGCCGGAGAAAGATAAGAAGAGCTATGAAGGAGGGATAATGACAGCAATGTCTACAGTTGTTGCAGATTTTGACAAATCTGGATATGGTGCAGTGATCCAAACACCTATGTTGCATCCGGGTATGTTCTCGGTTCTAATGCCATGGACTTCAGGACTCGATATAAAAGACCGAATGCGCAAGTATTCTAGAACAGCTCATGTGTTTGCACTGGCAAGGGATCAAGGATCAGGAATTGTGAACTCACCTAACAGTATAAGTTATCAGATGAACGACGTCGACAAAGAGAATTTAAAGAAAGGAATCGAGAAGGTACTGCGAATTCTGGCAGCTGCAGGAGCTGAAGAAATCGGCACACATCATAATAAAGGAAGGAGGTTACTTGTAAAACAAGTAAGCTATAATGAGTTTGACAAATTTGTGCAAGAAGAAAGTTCAAGACCTTTAACCGATCTTTCGACGCCTTTATGCTCGGCGCATCAGATGGGAAGTTGTAGGATGGGTAGCAATCCAAAGGAATCTGTTGTTAACCAAATGGGAGAGACATGGGAAATTGAAGGCCTTTTTCTTGCAGACACAAGTGTTTTCCCTACAGCTTTGGGTGTGAATCCAATGGTTACTGTTCAAGCTATTGCTTATTGCACTGCTCAATCTGTTCTTCAAGTTCTTAGAAGGAAAAGAACTAAGTGA 2598 0.3938 MEENGERNSINGSFKLGVKDVKIHTVVELSSVDTHNLLVDCNSDVDVEEEDREKEKKPFTKSLSQRQMKSLVAICDTLLPSIKDHSLVVGSSHQSVANFYQTSASMAGTPQLIGTLISEKLQHPNTWLLRITLWLLSTWFGTLILCGISSLSLKFPFFHNFSKLSLQKRQQIMLSWSLSYFNLLRMFFRSVKLLTLLLFFTQQYCGYDDRHNRITPQLWCDVTASRYNITASGRKANESDHIWTALGRLDEAQNNPSWSAIGYSGPDPQFKPQLKNNFLHKSSKGEEQDEKKDDDDDDDDDEIIGPLNKGIVHLNQPPNIIADTLRQFGFFVSVTQRKPKVSYNLSYPSLVIQCDAVVVGSGSGGGVVAGVLSEAGYKVLVLEKGNYSARNNLSLLEGPTFDQMYLSNGFLATQDMSLLLLAGSTVGGGSAINWSACIKTPKHVCKEWCDSYELELFESEVYEEAMNVVCEKMGVQSDIEEEGFNNEILRKGCEEMGYPVSNIPRNAPKDHYCGWCCMGCKDGKKKGTSETWLVDLVKSGNGAILPRCEAIQVLHKRKKGSDRKIASGVAFEIEYKGSKEICVVESKVTIVACGALSTPSLLKRSGLKNENIGRYLHLHPTTMAWGYFPDSPSPEVWPEKDKKSYEGGIMTAMSTVVADFDKSGYGAVIQTPMLHPGMFSVLMPWTSGLDIKDRMRKYSRTAHVFALARDQGSGIVNSPNSISYQMNDVDKENLKKGIEKVLRILAAAGAEEIGTHHNKGRRLLVKQVSYNEFDKFVQEESSRPLTDLSTPLCSAHQMGSCRMGSNPKESVVNQMGETWEIEGLFLADTSVFPTALGVNPMVTVQAIAYCTAQSVLQVLRRKRTK 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1780 865 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 42 203 - -
Lal16g1780 865 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 247 865 - -
Lal16g1780 865 Pfam GMC oxidoreductase 722 850 IPR007867 GO:0016614
Lal16g1780 865 Gene3D - 345 660 IPR036188 -
Lal16g1780 865 MobiDBLite consensus disorder prediction 279 304 - -
Lal16g1780 865 SUPERFAMILY FAD/NAD(P)-binding domain 351 856 IPR036188 -
Lal16g1780 865 Pfam GMC oxidoreductase 355 621 IPR000172 GO:0016614|GO:0050660
Lal16g1780 865 PIRSF Lg_Ch_AO 210 865 IPR012400 GO:0046577
Lal16g1780 865 PIRSF Lg_Ch_AO 50 213 IPR012400 GO:0046577
Lal16g1780 865 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 42 203 - -
Lal16g1780 865 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 247 865 - -
Lal16g1780 865 Gene3D - 780 862 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1780 Lal-Chr16 16871543 16878684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1780 44 859 Acyl Lipid Metabolism Gene Families AT4G19380 54.890 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1780 K17756 - gmx:100778208 1164.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1780 16 16871543 16878684 Lal16g1780 16 16871543 16878684 ECH
Lal15g0331 15 2231376 2237489 Lal16g1780 16 16871543 16878684 PCT
Lal16g1780 16 16871543 16878684 Lal15g0331 15 2231376 2237489 PCT