Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0331 ATGCACACATATCTAGTATTCTCTATCTTTAATATTTTGATAAAAATAAGCATGGAGGAGAAGAATATAATGAGAAATGGAAGCACTAGAAAGAGGGGAGTGAAAGATCATACAGTGGTTGAACTTGGTAATATAGACACACAAAGGTTACTTCTAAATGGTGGTGGAGAAAGAGAGAAACAACAATCTTTTCTTAATAACTCTCTCTCACAAAGGCAGATGAAATCTCTCACTGCTCTTTGTGACACTATATTACCTTCTGTTAATGACTTTGTTGGTGTCTCTGATGATGAATCTGTTGCCAAGTTCTACTTGACTTCAGCTTCCATGGCTGGAACACATGACCGTGTTGGGGGTGTAATAAGTGAGAGACTGAAACACCCCAATACAGGGTTACTGAAGCTTGTGTTATGGCTGTTGTCTACATGGTTTGGGACTATCATTTTATGTGGCATGGCTAGCTTCTCAACCAAGTTTCCCTTCTTCCATTGCTACCCTGACATGTCTCTCCATAAACGCCAACAGATTATGCATTCATGGTCTCTTAGTTACTTTCGTCACCTTAGGATGTTGTTCAGGACAGTTAAACTTCTCACTCTTCTTCTCTTCTTCACTCAGATAGATGAATCAGAAGATAACCCATCTTGGAAGGCAATTGGATACTGTGGACCTGATCCAGAATTCAAAGCACAGTTAAAGAACCATTTTTTACATGGAACATCAAAAGGAGGGCAAGAGCAAAAACAAGATGATGGTGATGCTGCAGAAGTTGCAGGGCCACTTTACAAAGGTCTTGTCCATCTGAATTACCCACGGGATATCACGGCAGATGGTCTAAGACGATGCGGGTTCGGTGTTTCGGTTACTCGTAGAAAGACTAAAGCTGTTGCTGGCAGCTTATCATCTCCTTCTCTAGTCATCCAATGCGATGTAGTGGTACTTGGTTCTGGCTCAGGTGGTGGTGTGGTAGCTGGTGTTCTGGCAAAAGCTGGCTACAAAGTGTTGGTTTTGGAGAAAGGAGGCTATTATGCTAGGAACAATCTTTCCCTTCTTGAAGGACCAACCATGGATCAAATGTACCTTAATGGTGGTTTTGTTGCAACCGACGACATGGGTGTATTCATTCTAGCAGGATCCACTGTTGGTGGAGGCTCTGCAATCAACTGGTCTGCATGCATTAAAACCCCTGAGCATGTATGCAAGGAGTGGTGTGATAGCAATGAGTTAGAATTATTTGAAAGTAAATTATACAAAGAAGCAATGGATGTTGTGTGTGAGAAAATGGGAGTTCAATCTGAGATTGGAGATGAAGGATTGAATAACGCGGTACTACGAAGAGGGTGTGAAGAAATGGGGTACCCTGTGAATAATATTCCTAGGAATTCGCCACCAGATCACTACTGCGGATGGTGTTGTATGGGTTGTAAGGATGGAAGGAAGAAGGGTACCTCAGAAACATGGTTGGTGGACTTGGTGAAATCTGGTAATGGAGCAATTCTTCCAGGTTGTGAGGCAATAAAAGTCTTGCACAAGAAAAAGAAAGGAAGTGATCGAAAGATAGCGCGAGGAGTGGCATTTGAATACGAATACAACGGAAGTAAGGACATGTGTGTGGTGGAGTCCAAGGTCACAATTGTAGCATGTGGAGCACTAAGAAGTCCAACATTACTAAAAAGAAGTGGCTTAATGAATGCCAACATAGGGAGAAATTTGCATCTTCATCCAGTGACAATGGCTTGGGGATACTTCCCAGATGAACCTGCATCTGAGGTATGGCCCGAGGCAACGAAAAAGAGCTTCGAAGGAGGGATAATGACAGCAATGTCTCCTGTTGTTGCAGAGTTTGACAAATCTGGATATGGTGCAGTGATCCAAACACCTGCATTGCATCCTGGTATGTTTTCAATTGTCATGCCATGGATTTCTGGAACTGATATAAAACACCGAATGCGAAAATTTTCTAGAACTGCTCATATATTTGCACTGGCAAGGGATAAAGGATCAGGGACTGTGAATTCACCAAGCTGTATCAGTTATGAGATGGAAGATACTGATGAAGAGAATTTAAAGAAAGGGATTGATAAAGTACTGAGAATTTTGGCAACAGCTGGAGCTGAAGAAATTGGAACACATCATAGTAAGGGGAGAACCTTAAAAGTAAAGGAGGCTAGTTATAATGAATTTGAGAAATTTGTTAAAGAAGAAAGTTCAAGGCCATTAAAAGACCTTTCAACACCATTGTGCTCGGCGCATCAGATGGGAAGCTGTCGAATGGGTTCGAATCCGAAGAATTCAGTGGTGAATGAGGCCGGAGAGACATGGGAAATGGAGGGGCTTTATGTGGCAGATTCAAGTGTTTTCCCTTCAGCTTTGGGTGTTAATCCAATGATCACTGTTCAAGCTATTGCTTATTGCACAGCACAATCTGTTCTTAATGCTCTTAGAAGGAAAACAAATAGATGA 2463 0.419 MHTYLVFSIFNILIKISMEEKNIMRNGSTRKRGVKDHTVVELGNIDTQRLLLNGGGEREKQQSFLNNSLSQRQMKSLTALCDTILPSVNDFVGVSDDESVAKFYLTSASMAGTHDRVGGVISERLKHPNTGLLKLVLWLLSTWFGTIILCGMASFSTKFPFFHCYPDMSLHKRQQIMHSWSLSYFRHLRMLFRTVKLLTLLLFFTQIDESEDNPSWKAIGYCGPDPEFKAQLKNHFLHGTSKGGQEQKQDDGDAAEVAGPLYKGLVHLNYPRDITADGLRRCGFGVSVTRRKTKAVAGSLSSPSLVIQCDVVVLGSGSGGGVVAGVLAKAGYKVLVLEKGGYYARNNLSLLEGPTMDQMYLNGGFVATDDMGVFILAGSTVGGGSAINWSACIKTPEHVCKEWCDSNELELFESKLYKEAMDVVCEKMGVQSEIGDEGLNNAVLRRGCEEMGYPVNNIPRNSPPDHYCGWCCMGCKDGRKKGTSETWLVDLVKSGNGAILPGCEAIKVLHKKKKGSDRKIARGVAFEYEYNGSKDMCVVESKVTIVACGALRSPTLLKRSGLMNANIGRNLHLHPVTMAWGYFPDEPASEVWPEATKKSFEGGIMTAMSPVVAEFDKSGYGAVIQTPALHPGMFSIVMPWISGTDIKHRMRKFSRTAHIFALARDKGSGTVNSPSCISYEMEDTDEENLKKGIDKVLRILATAGAEEIGTHHSKGRTLKVKEASYNEFEKFVKEESSRPLKDLSTPLCSAHQMGSCRMGSNPKNSVVNEAGETWEMEGLYVADSSVFPSALGVNPMITVQAIAYCTAQSVLNALRRKTNR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0331 820 Pfam GMC oxidoreductase 678 805 IPR007867 GO:0016614
Lal15g0331 820 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 29 818 - -
Lal15g0331 820 Gene3D - 297 624 IPR036188 -
Lal15g0331 820 Pfam GMC oxidoreductase 310 576 IPR000172 GO:0016614|GO:0050660
Lal15g0331 820 SUPERFAMILY FAD/NAD(P)-binding domain 307 813 IPR036188 -
Lal15g0331 820 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 29 818 - -
Lal15g0331 820 PIRSF Lg_Ch_AO 56 820 IPR012400 GO:0046577
Lal15g0331 820 Gene3D - 732 818 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0331 Lal-Chr15 2231376 2237489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0331 34 814 Acyl Lipid Metabolism Gene Families AT4G19380 57.015 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0331 K17756 - gmx:100779139 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0331 15 2231376 2237489 Lal15g0331 15 2231376 2237489 ECH
Lal15g0331 15 2231376 2237489 Lal16g1780 16 16871543 16878684 PCT
Lal16g1780 16 16871543 16878684 Lal15g0331 15 2231376 2237489 PCT