Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1502 ATGGCAGAAATTAAGGTTACAAGGGTGGGGCAAGGCCAAACCAAGATTAAGAATGTTCCAATAGCTGTCACCCCTGAAGGTTTTTGGTGTTGCCCTTCACCTGTTGTGTTTCAGAAAAGCCTCAAGGCTCAAAATCCTATGAATAAACCTAAAGCACCATGTTCGCCCCCAACGAAAACTAGTGTCCAGAAAAAGCCAGCGCCTGTGCCAGTTCCGGTGAGTGAGAGAAGAGCTTCTGCAGCTGCACCTACCCTATCAAAATTGTTGCTTTCTGATGATCAACAATGTAGTTCTGGTCCTGAAAGAACTCCAGCTAGAACAACTATGGCAGCAGATAGAGGCCCTAGACCCAAAATTGAAACTTTGCCAAGGAAGGTAGCTATTGAGTTTGGTGAACCTGGAACTTGTGATATGAAGGTGGTTTTGTTAGGAAAGCAGGGATTTTGTGTGAAGTTAAGTGTGCATAAGGATGTTCTGGCTGAGAAGAGTAGCTTCTTTGCTGATAAACTTTCTGAACAAGCGGGTTTGTCATGTCTTCAAATTGATGATTGCGAGGATGTTGAAATATATGTTGAAACTGTCGGTCTCATGTACTGCAAGGATATGAAGCAGCGGCTTATGAAGCAAAGTGTTTCTCGCATTCTTAGAATACTAAAGGTTGCAGAATTCCTTGGCTTCAGCTCATGTATCCAACCATGTTTGGATTACTTGGAAGCAGTCCCTTGGGTTGGAGACGAGGAAGAAGAAAAGGTGGTTTCAACCGTACTACGACTTCAAGCAGGAGTTAAGGTCAACCCTGTCCTGAAACGAGTCTCTTCTGATATTTCTAATGTCCCGAAAGATACCCTTTTCCAAATTATCAAACTTGTTCTCAATAGCAACGAGGAAAGAGGTCGCCGAGAGATGAAATCCATAGTTCTGAAGCTCCTTAGGGAGAATAACAACAGTCTTCCAAGCCAAGCTGTTTCATCTGTAATCTGTAATGACATGATTTATGGATCATGCAGAAGCTGCTTAGATTCATTACTGTCTCTTTTCAAGCAGGCTACAGAACCAGCCTTTTCAGACAAACCAAGTGATTACAGAGATCCTATAATAAAGCATATAGCTCTTGAAGCCGATAACTTGTCATGGTTGCTCGATATTTTAATTGACAAACTAGCTGCTGATGAATTTGCATTGATGTGGGCAAACCAGCAGGAACTGGCAACGTTACATGTAAAACTGCCAATTGTGTTGCGCTATCATGTTAGCTGCATTTCCGGAAGACTATTTGTTGGCATTGGTAGAGGGCAATTATTGCCGTCGAAGGACATGCGCCAATTGTTGTTACAGACATGGCTACAGCCCCTAATGAATGATTATAACTGGTTACAGCACGGATGCAGGTCATTTGACGGGAAACTTGTGGAGGAAGGAATCGGTAGGACAATTCTCACCTTGCCTCTGGAGGATCAACAAAGCATTTTGCTCTCATGGTTGGGAAGTTTCTTGAAAACCGGCGATAGTTGTCCTAATCTTCAGAGAGCTTTCGAGGTTTGGTGGAGGAGAACTTTCATTAGACCACATGTGGAAAGTCAAGGTAATGCTATGTCAGATAGGTCAATGTTGTTGTCAAAGCAACATGAATAA 1632 0.4283 MAEIKVTRVGQGQTKIKNVPIAVTPEGFWCCPSPVVFQKSLKAQNPMNKPKAPCSPPTKTSVQKKPAPVPVPVSERRASAAAPTLSKLLLSDDQQCSSGPERTPARTTMAADRGPRPKIETLPRKVAIEFGEPGTCDMKVVLLGKQGFCVKLSVHKDVLAEKSSFFADKLSEQAGLSCLQIDDCEDVEIYVETVGLMYCKDMKQRLMKQSVSRILRILKVAEFLGFSSCIQPCLDYLEAVPWVGDEEEEKVVSTVLRLQAGVKVNPVLKRVSSDISNVPKDTLFQIIKLVLNSNEERGRREMKSIVLKLLRENNNSLPSQAVSSVICNDMIYGSCRSCLDSLLSLFKQATEPAFSDKPSDYRDPIIKHIALEADNLSWLLDILIDKLAADEFALMWANQQELATLHVKLPIVLRYHVSCISGRLFVGIGRGQLLPSKDMRQLLLQTWLQPLMNDYNWLQHGCRSFDGKLVEEGIGRTILTLPLEDQQSILLSWLGSFLKTGDSCPNLQRAFEVWWRRTFIRPHVESQGNAMSDRSMLLSKQHE 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1502 543 MobiDBLite consensus disorder prediction 44 77 - -
Lal16g1502 543 CDD BTB_POZ_ZBTB_KLHL-like 136 224 - -
Lal16g1502 543 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 1 531 IPR038920 -
Lal16g1502 543 PANTHER BTB/POZ DOMAIN PROTEIN 1 531 - -
Lal16g1502 543 MobiDBLite consensus disorder prediction 92 117 - -
Lal16g1502 543 Gene3D Potassium Channel Kv1.1; Chain A 130 256 IPR011333 -
Lal16g1502 543 SUPERFAMILY POZ domain 135 237 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1502 Lal-Chr16 11980021 11983863 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1502 - - gmx:100789609 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1502 16 11980021 11983863 Lal16g1502 16 11980021 11983863 ECH
Lal15g1501 15 17133304 17137240 Lal16g1502 16 11980021 11983863 LSH
Lal15g0145 15 1005780 1009712 Lal16g1502 16 11980021 11983863 PCT
Lal16g1502 16 11980021 11983863 Lal15g0145 15 1005780 1009712 PCT