Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1501 ATGTCTATATCTTCTGGGATTTGTGTTACCCCATCGATATGTTTCCGACCACCGCTTTCTCGCCTTGGATCACGGCGTTTTCCGGTTAAGGAATTTTCTGTTTCTGGGAAGAATAAACAAGTGGCAAAGTTTCTTGTAGCTGAAAGAACAAGTTTTTTGTCTTCTACTTTAAAGTGGAATAGGCGACAAGTTCAATTGGTCAAAAGTTCCATGGATGCTTCATTTGGTGATATGGCAAATGAATCTTCTGCTGTTTTTCCAAGAATTAATGTGGGGGATCCATATAGGCGACTTGGAATAAGCAAGGAAGCTTCTGAAGATGAAATTCAAGGGGCAAGGAACTTCCTGATTCAAAAATACGCAGGGCATAAGCCTAGTGTAGATGCAATTGAGTCAGCGCATGACAAAATAATCATGCAGAAGTTCTATGACCGGAAGAACCCAAAAATCGACATCAAGAAAAAAATCCGGGAAGTAAATCAATCTCGATTGGTTCAGTTTGTCAGAGGAAGGTTTCATACTCCATCCACAAAGTTTATTATAAAAACATCACTAACATTCTTATTACTTGGAGTTCTGACTGTTCTCTTTCCAACTGAGGAAGGACCAACACTTCAGGTAGCACTATCTCTAATCGCTACGCTCTATTTTGTACATGAACGGCTCAAGAGCAAGTTCCGATCTTTCCTTTATGGAGTTGGGGCATTTATTTTTTCTTGGCTTTTCGGAACCTTCTTGATGGTAGCAGTAATTCCTCCAATTCCTATACTCAAAGGACTAAGAGCATTTGAAGTAATCACATCGTTGATAACATATTTGTTATTATGGGTTTCATCTACATATCTTAAGTGA 852 0.3897 MSISSGICVTPSICFRPPLSRLGSRRFPVKEFSVSGKNKQVAKFLVAERTSFLSSTLKWNRRQVQLVKSSMDASFGDMANESSAVFPRINVGDPYRRLGISKEASEDEIQGARNFLIQKYAGHKPSVDAIESAHDKIIMQKFYDRKNPKIDIKKKIREVNQSRLVQFVRGRFHTPSTKFIIKTSLTFLLLGVLTVLFPTEEGPTLQVALSLIATLYFVHERLKSKFRSFLYGVGAFIFSWLFGTFLMVAVIPPIPILKGLRAFEVITSLITYLLLWVSSTYLK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1501 283 Pfam Protein CHAPERONE-LIKE PROTEIN OF POR1-like 103 282 IPR021788 -
Lal15g1501 283 PANTHER DNAJ (DUF3353) 6 283 - -
Lal15g1501 283 PANTHER - 6 283 IPR021788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1501 Lal-Chr15 17133304 17137240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1501 - - gmx:100803419 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1501 15 17133304 17137240 Lal15g1501 15 17133304 17137240 ECH
Lal15g1501 15 17133304 17137240 Lal16g1502 16 11980021 11983863 LSH
Lal15g1501 15 17133304 17137240 Lal16g1837 16 17459358 17462344 LSH
Lal15g0145 15 1005780 1009712 Lal15g1501 15 17133304 17137240 PCT
Lal15g1501 15 17133304 17137240 Lal15g0145 15 1005780 1009712 PCT