Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1289 ATGAGCAGTCTCCCTCAAACGCATGGAGAAACCGTCCCAGATGCTTGGGACTGCAAGGGTCGCCAAGCAGAGCGGTCCAAAACTGGTGGTTGGATTGCAGCAGCCATGATCTTAGGAGGAGAAGCATGCGAGAGGTTAACAACACTTGGCATAGCCGTAAATTTGGTGACATATTTGACGGCTACCATGCATTTGGGTAATGCTTCTTCTGCCAATATAGTTACCAACTTCCTGGGAACCTCTTTTATTCTTTGTTTGCTAGGTGGATTTGTAGCTGACACTTTCATAGGCAGATACCTCACAATAGCTATCTTTGCAACCGTTCAAGCCACAGGTGTTATAATCTTGACAATATCAACCATAATTCCAACCCTACATCCTCCAAAATGCATAGAAAACAGTGGCAAACCGTGTGTACCCGCAAACAACTTTCAACTAATGGTTCTCTATTTAGCACTTTACACCACAGCACTAGGCACGGGTGGTTTGAAATCAAGTGTCTCAGGATTTGGGTCTGATCAGTTTGATGATTCAGACAAAGGGGAGAAACAAAAGATGGCAAAGTTCTTCAACTGGTTCTTCTTCTTCATAAGTATAGGTTCATTGGCCGCAGTGACAGTTCTTGTGTACATTCAAGACAACCTAGGTAGAGATTGGGGTTATGGGATATGTGCCTGTGCTATTTTGTTGGCTCTTGTTGTGTTCTTGTTGGGTACGAGGAGGTACCGGTTTAAGAAACTGGTGGGTAGTCCTCTGACTCAGATTGCGGTGGTGTTTGTGGCGGCGTTGAGGAAGAGGAAAATGGAGTTGCCTTCTGATCCGGTTTTGTTGTTCAATGTTGATGAAACAATGATGAAGAAGAAGCAGAGGTTGCCCCATAGCAAGCAGTTCCGCTTCTTGGACAAGGCTGCAATCAAGGACTCAAACATAGATATTGAATTCACTGAGGAAAGAAAGTGGTATCTATCAACTTTAACAGATGTTGAAGAAGTTAAATTGGTTATAAGAATGCTACCTATCTGGGCCACCACCATAATGTTTTGGACAGTCTATGCTCAAATGACCACATTCTCAGTGTCACAAGCCACCACCATGAACCGCCACATCGGAAAATCATTCCAAATCCCAGCCGCATCTCTCACCGTCTTCTTCGTCGGAAGCATCCTCTTAACCGTTCCTTTTTATGACCGTGTCATTGTTCCCATAACAAGGAAAGTTTTAAAGAACCCACAAGGACTAACCCCTTTGCAACGCATTGGTTTAGGGTTAGTATTTTCCATCTTTGCTATGGTTGCAGCAGCACTAACCGAAATAAAGCGCTTAAGAGTAGCTCAATCACATGGTTTGACACATAACCCTAATGCTATGATTCCCATGAGTGTGTTCTGGTTGGTGCCACAATTCTTCTTTGTGGGGTCAGGTGAGGCATTTACCTATATAGGACAGTTAGATTTCTTCCTTAGAGAATGCCCTAAAGGGATGAAAACCATGAGCACTGGACTTTTCTTGAGCACACTGTCTTTAGGGTTTTTCTTTAGCACTTTATTGGTTACTATAGTGAACAAAGTGAGTGGCCATAACAAGCCATGGCTTGCAGACAATCTTAACAAAGGAAGACTCTATAACTTCTATTGGCTTTTGGCCTTGTTAAGTGCTTTAAATGTGGTCATATACTTGTTTTTTGCTAAGGGGTATGTGTACAAGGAAAAAAGGCTTGTGGAGGAAGGTATAGAACTGGAAGAACAAGACGCTGCTTACCATGCATAG 1767 0.4312 MSSLPQTHGETVPDAWDCKGRQAERSKTGGWIAAAMILGGEACERLTTLGIAVNLVTYLTATMHLGNASSANIVTNFLGTSFILCLLGGFVADTFIGRYLTIAIFATVQATGVIILTISTIIPTLHPPKCIENSGKPCVPANNFQLMVLYLALYTTALGTGGLKSSVSGFGSDQFDDSDKGEKQKMAKFFNWFFFFISIGSLAAVTVLVYIQDNLGRDWGYGICACAILLALVVFLLGTRRYRFKKLVGSPLTQIAVVFVAALRKRKMELPSDPVLLFNVDETMMKKKQRLPHSKQFRFLDKAAIKDSNIDIEFTEERKWYLSTLTDVEEVKLVIRMLPIWATTIMFWTVYAQMTTFSVSQATTMNRHIGKSFQIPAASLTVFFVGSILLTVPFYDRVIVPITRKVLKNPQGLTPLQRIGLGLVFSIFAMVAAALTEIKRLRVAQSHGLTHNPNAMIPMSVFWLVPQFFFVGSGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFFSTLLVTIVNKVSGHNKPWLADNLNKGRLYNFYWLLALLSALNVVIYLFFAKGYVYKEKRLVEEGIELEEQDAAYHA 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1289 588 Pfam POT family 99 530 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal16g1289 588 Gene3D MFS general substrate transporter like domains 5 575 IPR036259 -
Lal16g1289 588 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 579 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal16g1289 588 SUPERFAMILY MFS general substrate transporter 20 566 IPR036259 -
Lal16g1289 588 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3 10 579 - -
Lal16g1289 588 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1289 Lal-Chr16 9117233 9124251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1289 3 582 Organic Solute Cotransporters AT1G12110 65.017 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1289 - - qsu:112013950 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1289 16 9117233 9124251 Lal16g1289 16 9117233 9124251 ECH
Lal15g1339 15 15441030 15447721 Lal16g1289 16 9117233 9124251 LSH