Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1339 ATGAGCAGTGTCCCTGAAACGCATAGGGAAACTATCCCAGATGCTTGGGACTACAAGGGTCAACCTGCAGAGAGGTCCAAAACCGGTGGTTGGATTGCAGCAGCTATGATCTTAGGAGGAGAAGCATGCGAAAGGTTAACAACACTAGGCATTGGCGTAAATTTGGTGACATATTTGACAGCTACCATGCATTTGGGTAATGCTTTTTCTGCCAACATAGTCACTAACTTCATGGGAACCTCTTTTATGCTTTGTTTGCTTGGTGGATTTCTAGCTGATACTTTCATTGGCAGATACCTGACCATAGCTATCTTCGCAACAGTTCAAGCAACTGGTGTTTTAATCTTAACCATATCAACCATAATCCCAACCCTACATCCTCCAAAATGCACAGAAAACAGTGGCAAAACTTGTGCTCCTGCAAACAACTTACAACTAATGATTCTCTATTTAGCTCTTTACACCACAGCACTTGGCACTGGTGGTATTAAATCAAGTGTATCAGGCTTTGGTTCTGATCAGTTTGATGATTCAGACAAAAGGGAGAAACAAGACATGACAAAGTTCTTCAACTGGTTCTTCTTCTTCATAAGCATAGGGTCTTTGGCTGCAGTAACAGTTCTTGTGTACATTCAAGACCACATAGGAAGAGATTGGGGTTATGGAATATGTGCTTGTGCTATATTGTTTGCACTTGTGGTGTTCTTGTTGGGTACGAGGAAGTATAGGTTCAAGAAACTTGTGGGTAGTCCTTTGACACAGATTGCGGTGGTGTTTGTGGCGGCGCTGAGGAAGAGGAAAATGGAGTTGCCGTATGATTCGGCGTTGTTGTTCAATGTTGATGAAACAATGATGAAGAAGAAGGAGAGGTTGCCACATAGCAAACAGTTCCGCTTCTTGGACAAGGCTGCAATCAAAGACTCAAACACAAATAGTGAAGTGAATAAAGAAAAGAAATGGTATCTATCAACTTTAACTGATGTTGAAGAAGTGAAATTGGTGATAAGAATGTTACCCATATGGGCCACCACCATCATGTTTTGGTCAGTCTATGCTCAAATGACTACATTCTCAGTGTCCCAAGCCACCACCATGAACCGCCACATCGGAAAATCATTCCAAATTCCGGCGGCATCTCTCACCGTCTTCTTCGTCGGAAGCATCCTCTTAACTGTCCCCATCTACGACCGTGTCATTGTTCCTATAACAAGGAAAGTTCTAAAGAATCCACAAGGGCTAACACCTTTGCAACGCATTGGTCTAGGGTTAGTATTTTCCATATTTGCAATGGTGGCTGCAGCATTAACCGAAATAAAGCGCTTAAATGTGGCTAAGTCACATGGTTTGACACATGACCCTAATGCTAAGATACCCATGAGTGTGTTTTGGTTGATACCACAATTCTTCTTTGTGGGGTCAGGAGAAGCATTTATCTATATAGGGCAGTTAGATTTCTTCCTTAGAGAATGCCCTAAAGGGATGAAAACAATGAGCACAGGACTTTTCTTGAGTACATTGTCTTTGGGGTTTTTCATTAGCTCCATGTTGGTGACTATAGTGAACAAAGTGAATGGCCATAACAAACCATGGATTGCAGACAATCTTAACGAAGGGAGACTCTATAACTTCTACTGGCTTTTGGCTTTGTTAAGTGCCATAAATGTGGTTATATACTTCTTTTTTGCTAAGGGGTATGTGTACAAGGAAAAAAGACTTGCTGAAGAAGGCATAGAACTACTGGAAGAACAAGATGCTGCTAACCATGCATAG 1770 0.4181 MSSVPETHRETIPDAWDYKGQPAERSKTGGWIAAAMILGGEACERLTTLGIGVNLVTYLTATMHLGNAFSANIVTNFMGTSFMLCLLGGFLADTFIGRYLTIAIFATVQATGVLILTISTIIPTLHPPKCTENSGKTCAPANNLQLMILYLALYTTALGTGGIKSSVSGFGSDQFDDSDKREKQDMTKFFNWFFFFISIGSLAAVTVLVYIQDHIGRDWGYGICACAILFALVVFLLGTRKYRFKKLVGSPLTQIAVVFVAALRKRKMELPYDSALLFNVDETMMKKKERLPHSKQFRFLDKAAIKDSNTNSEVNKEKKWYLSTLTDVEEVKLVIRMLPIWATTIMFWSVYAQMTTFSVSQATTMNRHIGKSFQIPAASLTVFFVGSILLTVPIYDRVIVPITRKVLKNPQGLTPLQRIGLGLVFSIFAMVAAALTEIKRLNVAKSHGLTHDPNAKIPMSVFWLIPQFFFVGSGEAFIYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFISSMLVTIVNKVNGHNKPWIADNLNEGRLYNFYWLLALLSAINVVIYFFFAKGYVYKEKRLAEEGIELLEEQDAANHA 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1339 589 Pfam POT family 99 530 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal15g1339 589 Gene3D MFS general substrate transporter like domains 4 575 IPR036259 -
Lal15g1339 589 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Lal15g1339 589 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 577 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal15g1339 589 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3 10 577 - -
Lal15g1339 589 SUPERFAMILY MFS general substrate transporter 17 565 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1339 Lal-Chr15 15441030 15447721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1339 3 582 Organic Solute Cotransporters AT1G12110 64.736 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1339 - - qsu:112040017 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1339 15 15441030 15447721 Lal15g1339 15 15441030 15447721 ECH
Lal15g1339 15 15441030 15447721 Lal16g1289 16 9117233 9124251 LSH