Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1161 ATGTATGTATTACAAAGGAAATGGTGGCATGCGGGGTTTCATTTAACGACGGCGATAGTGGGGCCAACGATACTAACTCTTCCATTTGCGTTCAGAGGATTGGGGTGGGTGCTTGGGTTCTTTTGCCTAACCATGATGGGTGTTGTTACTTTCTACTCTTATTATCTTATGTCTAAAGTGCTTGAACATTGTGAGAAATCTGGTCGCCGTTACTTTCGTTTCAGGGAACTCGCCGCAAATATCTTAGGGTCAGGATGGATGTTCTATTTTGTAGTAGTTATTCAAACGATGATCAACTTAGGAATTAGCATTGGGACAATCTTGTTTGCTGGGGAATGCCTTCAGCTCATATACTCCAGTATTTCACCTCATGGATCGTTGAAATTGTACGAGTTCATAGCAATGGTGTCAGTGGTGATGATGATTTTATCTCAGCTTCCTACTTTTCATTCCCTGCGCCATCTTAACTTTTTTGCGCTGCTTCTCAGCCTGGGCTACACTATGCTGTTGGTTGGTGCATGTATTTATGCAGGTGCATCAAAAAATGCCCCTCCAAAGAACTATTCCTTGGAATCTAAGGATTCTGCTAGGGTCTTCAGCGCTTTCACTGCCATCTCTATAATTGCTTCAATATATGGGAATGGCATATTACCCGAAATACAGGCAACTCTAGCACCCCCTGCCACTGGGAAGATGGTAAAAGGTCTTACTTTGTGTTATTCAGTAATTGCTGTGACATTCTACTCTGCTGCAATTTCGGGATATTGGGCATTTGGAAATAATTCCAATTCAATCGTTTTAATGAATTTGATTCCTGATGATGGACCTGCTTTGGCTCCAACTTGGGTCATTGGCCTTGGAGCCATCTTTATTCTTCTTCAACTCTTTGCCATTGGCCAGGTTTATTCTCAAGTTGCTTATGACGTAATGGAGAAGAAATCAGCGGATGTGAAACAAGGATTGTTTTCGAAAAGAAATCTGATTCCTCGCATAATTCTTCGATCAATTTACATGGCATTCTGTGGGTTTATGGCTGCAATGCTGCCATTTTTTGGAGACATCAATGCTATAGTTGGTGCTATTGGTTTCATCCCTCTGGATTTTGTTCTGCCTATGCTTATGTACAATATTACATACAAGCCTCCAAAAACATCCTTAACTTATTGGATCAACATGTTAATTATGGTTGTCTTCACGGGTACAGGAATCCTGGGAGCATTCTCTTCCATAAGAAAATTGGTGCTTGATGCCGGTCAATTTAAGCTCTTTAGCGATAGTGTTGTTGGTTAA 1290 0.4116 MYVLQRKWWHAGFHLTTAIVGPTILTLPFAFRGLGWVLGFFCLTMMGVVTFYSYYLMSKVLEHCEKSGRRYFRFRELAANILGSGWMFYFVVVIQTMINLGISIGTILFAGECLQLIYSSISPHGSLKLYEFIAMVSVVMMILSQLPTFHSLRHLNFFALLLSLGYTMLLVGACIYAGASKNAPPKNYSLESKDSARVFSAFTAISIIASIYGNGILPEIQATLAPPATGKMVKGLTLCYSVIAVTFYSAAISGYWAFGNNSNSIVLMNLIPDDGPALAPTWVIGLGAIFILLQLFAIGQVYSQVAYDVMEKKSADVKQGLFSKRNLIPRIILRSIYMAFCGFMAAMLPFFGDINAIVGAIGFIPLDFVLPMLMYNITYKPPKTSLTYWINMLIMVVFTGTGILGAFSSIRKLVLDAGQFKLFSDSVVG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1161 429 PANTHER GABA TRANSPORTER 2-RELATED 6 422 - -
Lal16g1161 429 PANTHER OS05G0424000 PROTEIN-RELATED 6 422 - -
Lal16g1161 429 Pfam Transmembrane amino acid transporter protein 7 413 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1161 Lal-Chr16 7922791 7925440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1161 1 428 Organic Solute Cotransporters AT5G41800 76.744 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1161 - - lang:109332959 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1161 16 7922791 7925440 Lal16g1161 16 7922791 7925440 ECH
Lal16g1161 16 7922791 7925440 Lal15g1446 15 16662330 16671185 LSH