Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1446 ATGTCAGATCCACCTAAGGAGGACCCCTTCCCGGAGAACCACCGTCCTCTAGTGGATGCTGGAGCTGCTTTTGTCCTCCAGTCCAAAGGTGAATGGTGGCATGCGGGGTTTCATTTAACAACTGCGATTGTGGGGCCAACAATACTAACGTTGCCATATGCATTCAGAGGATTAGGGTGGGGGCTTGGATGTTTTTGCCTCACAGTGATGGGAGTTGTAACTTTCTACTCTTATTATCTTATGTCCAAGGTACTTGATCATTGTGAGAACTCCGGCCGCCGCCACATCCGTTTCCGGGAACTTGCCGCCGATGTATTAGGGTCAGGATTGATGTTCTATTTTGTAATCTTAATTCAAACGGCAATCAACACAGGAATTGGCGTTGGAGCAATCTTGCTTGCAGGGGAATGCCTTCAGATTATATACTCGAGTATTTCACCTAATGGATCCCTGAGATTATACGAGTTCATAGGAATGGTGACAGTGGTGATGATAGTTTTATCTCAGCTTCCCACTTTCCATTCACTCAGACATATCAACTTTTTTTCACTTCTTCTCAGTCTCGGATACACCATCATTGTCGTTGTTTCATGTATTCATGCAGGTACATCAAAAAACGCCCCTCCAAGGGACTATTCTTTGGAAGCTAAGAACTCTACAAGGGTCTTCAGTGCCTTCACTGCTATCTCCATAATTGCTGCAATATATGGAAATGGCATATTACCCGAAATACAGGCAACACTAGCACCTCCTGCTACTGGGAAAATGGTAAAAGGGCTTAGTATGTGTTATGGTGTAATATTTGTGACATTCTACAGTGCTGCAATTTCTGGATATTGGGTATTTGGAAATAAATCAAATTCAAACATTTTAAAGAGTTTGTTACCTGATGATGGACCTGCTTTGGCTCCAACTTGGGTACTTGGCCTTGGAGTTATATTTGTTCTTCTTCAGCTCTTTGCCATTGGCCTGGTTTATTCCCAAGTTGCATATGAGATAATGGAGAAGAAATCAGCTGATGTGAAACAAGGGTTGTTTTCTAAAAGGAATCTCATTCCTCGCCTAATTCTTAGAACAATTTACATGGCATTCTGTGGGTTTATGGCTGCAATGTTACCATTTTTTGGAGACATCAATGCTGTGGTTGGTGCTATTGGTTTCATCCCTTTGGATTTTGTTCTACCTATGCTTCTATACAACATCACGTTCAAGCCTTCCAAAACATCCTTAACTTATTGGATCAACATGTCAATTATGGTTGTTTTCACAGGTGCAGGAATCATGGGTGCATTTTCTTCTATTAGGAAATTGGTCCTTGATGCCAATAAATTTAAGCTCTTTAGCAATGATGTTGTTGATTAA 1362 0.4148 MSDPPKEDPFPENHRPLVDAGAAFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGCFCLTVMGVVTFYSYYLMSKVLDHCENSGRRHIRFRELAADVLGSGLMFYFVILIQTAINTGIGVGAILLAGECLQIIYSSISPNGSLRLYEFIGMVTVVMIVLSQLPTFHSLRHINFFSLLLSLGYTIIVVVSCIHAGTSKNAPPRDYSLEAKNSTRVFSAFTAISIIAAIYGNGILPEIQATLAPPATGKMVKGLSMCYGVIFVTFYSAAISGYWVFGNKSNSNILKSLLPDDGPALAPTWVLGLGVIFVLLQLFAIGLVYSQVAYEIMEKKSADVKQGLFSKRNLIPRLILRTIYMAFCGFMAAMLPFFGDINAVVGAIGFIPLDFVLPMLLYNITFKPSKTSLTYWINMSIMVVFTGAGIMGAFSSIRKLVLDANKFKLFSNDVVD 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1446 453 Pfam Transmembrane amino acid transporter protein 29 436 IPR013057 -
Lal15g1446 453 PANTHER GABA TRANSPORTER 2 ISOFORM X1-RELATED 2 447 - -
Lal15g1446 453 PANTHER OS05G0424000 PROTEIN-RELATED 2 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1446 Lal-Chr15 16662330 16671185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1446 1 453 Organic Solute Cotransporters AT5G41800 81.898 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1446 - - lang:109332959 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1446 15 16662330 16671185 Lal15g1446 15 16662330 16671185 ECH
Lal16g1161 16 7922791 7925440 Lal15g1446 15 16662330 16671185 LSH