Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1156 CCACTCTACCTCTTCACTTTCCAATACCTCTCCCTCACACACTCTCCTATTGGCACTGCCATTTTCATTTTCTCTGTTTCTTACTTATCACATTGTTTTCAACTTTCCATGGAGAAACTTATGAATTTCATTAGCGTTTTCTCCGTGCTTCTACTTGTATGTTCACCTTTTGCTTTGGCTGGCCATGACTATGGACAAGCTTTAAGTAAGAGTCTTCTCTTCTTTGAAGCTCAGAGATCTGGTTACCTTCCTTCTAACCAGAGAGTAAAATGGAGAACTCATTCTGGTCTCAATGATGGAAAAGCTAGCGGGGTAGATCTAGTTGGAGGGTACTATGATGCAGGGGACAATGTGAAATTTGGGTTACCCATGGCATTTACGGTTACAATGATGTCATGGAGCATCATAGAATATGGGAAACAAATGGCTTCAAGTGGTGAACTTAGTAATGCTATTGCAGCTGTTAAGTGGGGTACTGACTATTTCATCAAAGCTCATCCTCAACCTGATGTTCTCTATGGAGAGGTGGGAGATGGTAACACTGATCATTACTGTTGGCAAAGGCCAGAGGATATGACCACTGACCGTCATGCTTATAAGATCGATCCAAGTAATCCCGGGTCGGATCTCGCCGGAGAAACCGCCGCCGCTATGGCAGCTGCCTCCATTGTTTTTCGTCACTCTAACCCTTCCTATTCCGCTGAGCTCCTCCGCCATGCCTACCAGTTATTTGATTTTGCGGATAAATACAGAGGCAAATATGACAGCAGCATCACCGTTGCCCAGAAGTATTATAGATCCGTTAGTGGCTACAATGATGAGTTGCTATGGGCTGCTGCATGGTTGTATGAAGCATCTAACAATCAGTATTACTTAGATTACCTTGGTACAAATGGTGACTCAATGGGTGGAACTGGTTGGGGCATGACTGAATTTGGTTGGGATGTTAAGTATGCTGGGGTTCAAACCTTAGTAGCCAAGTTCCTTATGCAAGGGAAAGCTGGTCATCATGCAGCAGTGTTTGAGAAATATCAGCAGAAGGCTGAGTATTTTATGTGTTCCTGTCTTGGTAAGGGTTCTAACAATGTTCGGAAGACTCCCGGTGGCCTCATATTTCGCCAGAGATGGAACAACATGCAGTTTGTCACAAGTGCTTCTTTCTTAGCCACTGTATACTCTGACTATCTTTCTTCCTCTGGCAAAAACCTGAGATGTAGTTCAGGCATTGCCCCTCCAGCTGAGCTTCTCTCCTTTGCAAAGTCTCAGACTGATTACATTCTTGGTGACAACCCAAGAGCCACAAGTTACATGGTGGGTTATGGAAACAACTTCCCTCAAAGAGTTCACCACAGAGGTTCATCCATTGTGTCTATTAAGGTTAACCCTTCATTTGTGAGCTGCCGCGGAGGTTATGCTACTTGGTTCAGCAGCAAAAGTAGCGACCCCAATCTACTTACCGGTGCTACCGTTGGTGGACCTGATGCATATGACAACTTTGTTGATGAAAGAGATAATTATGAGCAAACAGAGCCAGCGACCTACAACAATGCTCCTCTTATTGGTATTCTAGCACGTCTACAAGGCGGTCATGGCGGCTATAATCAGCTCCTTCCAGTTGTTGTTCCAGCTCCTAAGCCTGTCGTCACCAAGGCTCAACCATCCCCGAAACCGAAGATATCTCCATCTCCAGCTTCATGGTCAGGTCCAATTTCCATTGAACAAAAATCGACCAACTCTTGGGTTCACAATGGAAGAACTTACTACAGATACTCAACCATTGTGACTAACAAATCTAACAAGCCGATCAAGTCTCTCAATCTTTCAATATCAAAGCTTTATGGTCCAATTTGGGGTCTCACAAAGTCCGGTGATTCATACACTTTCCCATCATGGCTGAGCTCATTACAAGCAGGGAAAAGCCTTGAATTTGTCTACATCCATTCTGCTTCTCCAGCGGATATCTCGGTTGCGAACTACTTGTTGGCCTGA 1989 0.4454 PLYLFTFQYLSLTHSPIGTAIFIFSVSYLSHCFQLSMEKLMNFISVFSVLLLVCSPFALAGHDYGQALSKSLLFFEAQRSGYLPSNQRVKWRTHSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMASSGELSNAIAAVKWGTDYFIKAHPQPDVLYGEVGDGNTDHYCWQRPEDMTTDRHAYKIDPSNPGSDLAGETAAAMAAASIVFRHSNPSYSAELLRHAYQLFDFADKYRGKYDSSITVAQKYYRSVSGYNDELLWAAAWLYEASNNQYYLDYLGTNGDSMGGTGWGMTEFGWDVKYAGVQTLVAKFLMQGKAGHHAAVFEKYQQKAEYFMCSCLGKGSNNVRKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLSSSGKNLRCSSGIAPPAELLSFAKSQTDYILGDNPRATSYMVGYGNNFPQRVHHRGSSIVSIKVNPSFVSCRGGYATWFSSKSSDPNLLTGATVGGPDAYDNFVDERDNYEQTEPATYNNAPLIGILARLQGGHGGYNQLLPVVVPAPKPVVTKAQPSPKPKISPSPASWSGPISIEQKSTNSWVHNGRTYYRYSTIVTNKSNKPIKSLNLSISKLYGPIWGLTKSGDSYTFPSWLSSLQAGKSLEFVYIHSASPADISVANYLLA 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1156 662 SMART CBM49_2 570 650 IPR019028 GO:0030246
Lal16g1156 662 Pfam Glycosyl hydrolase family 9 64 523 IPR001701 GO:0004553|GO:0005975
Lal16g1156 662 Pfam Carbohydrate binding domain CBM49 570 647 IPR019028 GO:0030246
Lal16g1156 662 SUPERFAMILY Carbohydrate-binding domain 567 652 IPR008965 GO:0030246
Lal16g1156 662 Gene3D - 61 529 IPR012341 GO:0005975
Lal16g1156 662 PANTHER ENDOGLUCANASE 41 609 - -
Lal16g1156 662 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 499 517 IPR033126 -
Lal16g1156 662 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 425 451 IPR018221 -
Lal16g1156 662 SUPERFAMILY Six-hairpin glycosidases 61 538 IPR008928 GO:0005975
Lal16g1156 662 PANTHER ENDO-1,4-BETA-GLUCANASE 41 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1156 Lal-Chr16 7882645 7888996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1156 54 662 Glycoside Hydrolase AT1G64390 79.146 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1156 K01179 - gmx:100801949 1117.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1156 16 7882645 7888996 Lal16g1156 16 7882645 7888996 ECH
Lal16g1156 16 7882645 7888996 Lal23g0455 23 7236997 7251909 LSH