Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0945 ATGGCGAATTGGATCTCTTCTAAACTCAAAATCGATCAACAAGCAGCTGAATCGCTTCGGAAGAACGAGAGGCTTCGATCTGATGAACTTAGCATTGATGATGCTCCTGCGAAATCAGCGAGTTCTGTGTCTCTGAAGAATCAGTTGAAGAAGAAGAAAACTCATGATAACAGCAATGACTATCATGGGAAATTGTATAGTGATCCCAATTTCAATGTGTTTAAAACCACAACAAATGCACCCAAATCTGCCCCTACCCCTACACTGACTGATGCTGATTGGACCGAACTACTTAGCTCACCTAATCAGTCTTCGGCTTCTGCATTAAACCCTAGCCATAGCAATGGAATACCTGTAACTCGTGGTTTTAGCAGCAATAATAGTAGGAAGAAGGATATTGTGTCTTCGGGGTCATTGATTTCGGATGTAAAGAGGAACTCAAAGAGTGAGTCAAGATCTTTGAAGAAGTTGAACTCTTTGAAAGAAGTTAAATTGAGTAGAAAGGGTAGTGGTGATGTTGGGAAAGAATCTGAGATTGATGGTAACGGCAATGTTGAAAAGCTTGTGGTTGAGACAAATGATAAGCAAAATGAAAAGAATAGTTTTAATTATAGGGACTGTTCTCCGCAAGAAGATATGCAGGAAGAGAACGAAAATTTTGCTGCAGAAAGAATGGAAATATCGGTGGTTGATAAGGTACATGATGCTAAGATGGCAGGCGATGTTGGTGGTGGTCAATCGAGAAGTGAAATGAGTAGGGGTGAGCTTAATGCAGTCTCTAGAAATTCAACATCGGATGATTTGAAAAGGGTTATTTCTATGGCAAGCGATGAAAGTTCTGTTTCAGATACAGATTCTGGTTCAACTTCTGATTCTGAGAGTGAACGCGAGAGGGAGGAAATGAGAAAGAAGAGGGAGAGGGTTCTGGCTGAGAAAGCGGCAGCTAAAGCAATAAATGCTATCAAGGAACGGGAGAACACGGTGGCCAAATTGGAGGGGGAGAAGCAAAGTCTAGAGAAAATTCTTGAGGAGCGAGCTAAACAACAAGCACAAGAGGCTTCACAACTTCAGTCCACTATGATGGAAACAATGGAAGCTGTTGAGTTAGAAAAACAGAAACATAATAACACTAGAATGGAAATTCTTACACGTTTAGCTAAACTGGAGACTGCTAATGCTGATCTTGCAAGGTCTCTGGCATCTGTACAGTGGAACCTTGAAGTAGAGGTTAAAGAAGTGGCAGAATTCAGACAGCAAATTGCATCGAAAGAGTTGGTTCTTGAAGAGCTGAAAAGAAGCATAAGGAATCCTCAGCAAACTGGAGCTTCACAACTAGCTTCAAAAGGAGTTGAGCTTGAGCGAGAAATTCTTGAAGAAGAGCACTCTTTAATTGATGATAAAGTTGCACAATTGCAGGAAAAGGCAAGATTTAAAACTTGTGCAAGGAAGCTGGAAGCTGACATTGAAATGACAAGGAAGGAGATAGAAGAGCCAACAGAAGTTGAAGTTGAGCTCAAGCGAAGACTTCATCAGTTGACTGACCATTTAATACAGAAGCAAACCAAGGTTGAGTCACTCTCTTCTGAAAAAGGAAGTCTTGTGTTTAGAATTGAGGCAGTGTCAAGGTTGCTGGAGGAGAACATGTCAGCATCAGGCGCAACAGATATGAATGCTCCCTCCTCTTCAAGTGACTTAGGATCAGGATCATGGGACCTCTCTAATTCAAAGTTCAAGCCTATGTTAAAAGCAAGATTTCATTCTGGCAAGAGACAACTGGGATCACTGCTTGTGCAATTAGATTATATTTTTGTGACTGGTGCAGTTTTTTTGAAAAGGAACCCAACAGCAAAGTTATGGGCTTTGATTTACCTTGTTTGCCTTCATTTGTGGGTGATTTATATTCTAATGTCACATTCTGGGCCATCAAATGAGGGTAGATCTGGCGCTGTGATCTCATTGGAGAACATTAATAACACTGGAGGAGTATGA 1989 0.4108 MANWISSKLKIDQQAAESLRKNERLRSDELSIDDAPAKSASSVSLKNQLKKKKTHDNSNDYHGKLYSDPNFNVFKTTTNAPKSAPTPTLTDADWTELLSSPNQSSASALNPSHSNGIPVTRGFSSNNSRKKDIVSSGSLISDVKRNSKSESRSLKKLNSLKEVKLSRKGSGDVGKESEIDGNGNVEKLVVETNDKQNEKNSFNYRDCSPQEDMQEENENFAAERMEISVVDKVHDAKMAGDVGGGQSRSEMSRGELNAVSRNSTSDDLKRVISMASDESSVSDTDSGSTSDSESEREREEMRKKRERVLAEKAAAKAINAIKERENTVAKLEGEKQSLEKILEERAKQQAQEASQLQSTMMETMEAVELEKQKHNNTRMEILTRLAKLETANADLARSLASVQWNLEVEVKEVAEFRQQIASKELVLEELKRSIRNPQQTGASQLASKGVELEREILEEEHSLIDDKVAQLQEKARFKTCARKLEADIEMTRKEIEEPTEVEVELKRRLHQLTDHLIQKQTKVESLSSEKGSLVFRIEAVSRLLEENMSASGATDMNAPSSSSDLGSGSWDLSNSKFKPMLKARFHSGKRQLGSLLVQLDYIFVTGAVFLKRNPTAKLWALIYLVCLHLWVIYILMSHSGPSNEGRSGAVISLENINNTGGV 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0945 662 PANTHER GOLGIN SUBFAMILY A MEMBER 5 1 643 - -
Lal16g0945 662 MobiDBLite consensus disorder prediction 236 308 - -
Lal16g0945 662 MobiDBLite consensus disorder prediction 70 144 - -
Lal16g0945 662 PANTHER GOLGIN-84 1 643 IPR019177 GO:0007030
Lal16g0945 662 Coils Coil 454 474 - -
Lal16g0945 662 Pfam Golgin subfamily A member 5 434 637 IPR019177 GO:0007030
Lal16g0945 662 MobiDBLite consensus disorder prediction 145 182 - -
Lal16g0945 662 MobiDBLite consensus disorder prediction 19 222 - -
Lal16g0945 662 MobiDBLite consensus disorder prediction 250 288 - -
Lal16g0945 662 Coils Coil 413 433 - -
Lal16g0945 662 MobiDBLite consensus disorder prediction 19 33 - -
Lal16g0945 662 MobiDBLite consensus disorder prediction 289 308 - -
Lal16g0945 662 Coils Coil 298 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0945 Lal-Chr16 6269224 6274696 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0945 - - gmx:100803473 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0945 16 6269224 6274696 Lal16g0945 16 6269224 6274696 ECH
Lal16g0945 16 6269224 6274696 Lal15g0917 15 7017743 7023979 LSH