Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0917 ATGGCGAATTGGATCTCTTCCAAACTCAAAATCGATCAACAAGCAGCTGAATCCCTTCGAAAGAACGAGAAGCTTCGATCCAATGAACTTAGCATTGATTATGCTCCTGCGAAGCCAGGGAGTTCCGTGTCTCTGAAGAATCAATTGAAGAAGAAAACCGCTGATAACAACAATGACTATCATGGAAAATTGCATAGTGATCCTAATTTCAATGTGCTTAAAAATACAGTTCCAACTTCCCCCAAATCTAACCCTACTCCTACGCTTACAGATGCTGACTGGACCGAACTACTTAGCTCGCCTAATCAGTCTTTCGGTACTAGAGGGAACCCGAACCACGGTAGTGGAGTGTCTGGGACTCGCGGTTTGAGCAGAAATAATAGTAGGAAGCAGAAGAGTTCGTCTTCGGTGTCATTGGTTTCGAATGTAAAAAGGAATCCTGAGAGTGGTTCAAGGTCTTTGCAGAAGTTAAACTCTGTGAAAGAAGTTAAATTGAGTGGAAAAGATAGTAGTGATGAAGGGAAGGATTCTATTTCTACCTCTTCGGATTCGACCAAGAGGATTTCGAATGTAGAGTCTGAGACCGATGGTAAAGGCAGTGTTGAAAAGCTTGTGGATAAGACAAATGATAAGGGAAATGAAGAGAATGATTTGAGTTTTAATTATAGAGAGTTTTCTCCACAAGCAGATTTGCAGGAAGAGAATAGAAGTTTGGCTGCAGAAACAATGCCGGTATCCGTCGTTGATAAGGTGCATGAAGCTAAGATGGCAGGTGATGTTGGTCATGGTCAATTGAGAAGTGCAACAAGTAGGAATTTGCTTAATGCAGTCTCTAGGAGTTCAACATCTAATGGTTTGAGAAGGGTTTCTTCCATGGCAAGCGATGGAAGTTCTGTTTCAGACTCAGATTCTGGTTCAACATCTGGTTCTGAGAGTGAACATGAGAGGGAGGAAAGAAGAAAGAAGAGGGAGAGGGTTCTGGCTGAGAAAGCAGCAGCTAAAGCTATAAATGCTATCAAGGAACGGGAGAACTTAGTGGCCAAATTAGAGGGGGAGAAACAAAGTCTAGAGAAAATTCTTGAGGAGCGAGCTAAACAACAAGCACAAGAGGCGTCACAGCTTCAGTCCACTATGATGGAAACAATGGAAGCGGTTGAGTTAGAAAAGCAGAAACATAATAACACTAGAATGGAAATTCTTACACGTTTAGCTAAACTGGAGACTGCTAATGCTGATCTTGCAAGGTCCCTCGCAGCTGTACAGTCGAACCTAGAAGTAAAGGTTAAACAAGTGGCAGAACTCAGACAACATATTGCATCGAAAGAGTTGGTTCTTGATGAGCTCAGAAGGAGCATGAAAAATCCTCAGCAAACTGGAGCCTCTCAACTAGCTTCAAAAGGAGTTGAGTTTGAACGAGAAATTCTTGAGGCAGAGCACTCTTTAATTGATGATAAAGTTGCACAATTGCAGGAAAAAGCAAGGAAGCTGGAAGCTGACATTGAAATTACAAGGAAGGAAATAGAAGAGCCAACAGAAGTTGAAGTTGAGCTCCGGCGAAGGCTTCATCAGTTGACTGACCATTTAATACAAAAACAATCCAAGGTTGAGTCACTCTCTTCTGAGAAAGCAAGTATCATGTTCAGAATTGAGGCAGTGTCAAGGTTGCTGGAAGAGAACAACATATCAACATCTAGTGCAACAGATTTGAATACTGTCTCCTCTTCAAGTGACTTAGAATCAGGATTATGGGATCTCTCTAATTCAAAGTTGAAGCCTATGTTAAAAGCCAGATTTCATTCTGGCAAGAGACAACTGGGCTCACTGCTTGTGCAATTAGATTATATTTTTCTGACCAGCGCAGTTTTTTTGAAAAGGAACCCAACGGCAAAATTATGGGCTTTGATTTACCTTGTTTGCCTTCATTTGTGGGTGGTTTATATTCTAATGTCACATTCTGGGCCATCAAATGAGGGTAGATCTGGCGCTGTGATTTCATTGGAGAACATTAATAACACTGGAGGAGCATGA 2028 0.4167 MANWISSKLKIDQQAAESLRKNEKLRSNELSIDYAPAKPGSSVSLKNQLKKKTADNNNDYHGKLHSDPNFNVLKNTVPTSPKSNPTPTLTDADWTELLSSPNQSFGTRGNPNHGSGVSGTRGLSRNNSRKQKSSSSVSLVSNVKRNPESGSRSLQKLNSVKEVKLSGKDSSDEGKDSISTSSDSTKRISNVESETDGKGSVEKLVDKTNDKGNEENDLSFNYREFSPQADLQEENRSLAAETMPVSVVDKVHEAKMAGDVGHGQLRSATSRNLLNAVSRSSTSNGLRRVSSMASDGSSVSDSDSGSTSGSESEHEREERRKKRERVLAEKAAAKAINAIKERENLVAKLEGEKQSLEKILEERAKQQAQEASQLQSTMMETMEAVELEKQKHNNTRMEILTRLAKLETANADLARSLAAVQSNLEVKVKQVAELRQHIASKELVLDELRRSMKNPQQTGASQLASKGVEFEREILEAEHSLIDDKVAQLQEKARKLEADIEITRKEIEEPTEVEVELRRRLHQLTDHLIQKQSKVESLSSEKASIMFRIEAVSRLLEENNISTSSATDLNTVSSSSDLESGLWDLSNSKLKPMLKARFHSGKRQLGSLLVQLDYIFLTSAVFLKRNPTAKLWALIYLVCLHLWVVYILMSHSGPSNEGRSGAVISLENINNTGGA 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0917 675 Coils Coil 431 451 - -
Lal15g0917 675 Coils Coil 403 423 - -
Lal15g0917 675 MobiDBLite consensus disorder prediction 275 307 - -
Lal15g0917 675 MobiDBLite consensus disorder prediction 308 325 - -
Lal15g0917 675 Pfam Golgin subfamily A member 5 468 650 IPR019177 GO:0007030
Lal15g0917 675 PANTHER GOLGIN-84 1 656 IPR019177 GO:0007030
Lal15g0917 675 MobiDBLite consensus disorder prediction 162 180 - -
Lal15g0917 675 MobiDBLite consensus disorder prediction 69 160 - -
Lal15g0917 675 Coils Coil 472 506 - -
Lal15g0917 675 PANTHER GOLGIN SUBFAMILY A MEMBER 5 1 656 - -
Lal15g0917 675 MobiDBLite consensus disorder prediction 219 235 - -
Lal15g0917 675 MobiDBLite consensus disorder prediction 189 218 - -
Lal15g0917 675 Coils Coil 332 377 - -
Lal15g0917 675 MobiDBLite consensus disorder prediction 275 325 - -
Lal15g0917 675 MobiDBLite consensus disorder prediction 31 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0917 Lal-Chr15 7017743 7023979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0917 - - pvu:PHAVU_002G329100g 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0917 15 7017743 7023979 Lal15g0917 15 7017743 7023979 ECH
Lal16g0945 16 6269224 6274696 Lal15g0917 15 7017743 7023979 LSH