Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0462 ATGGCACTGAGCAACAATGTGATAGGAGCCATTAACTTCATTGGTGTGCTCCTCTCAATCCCAATCATAAGTGCTGGAATCTGGCTAACAAATGGTGCTGCCGATTCCTGTGTCAAGTTTCTACAATGGCGTCTAATCATCTTAGGGGTTCTGATCTTGATTGTTGCTCTGGCAGGTTTCATTGGAGCCATTTGGAGAATCCAATGCCTTATCATATTTTACCTCATTGCCATGCTAGTGCTTATCATATTGGTGGTTTGTTTGGTGGTTTTTGTCTATATGGTCACCATTAGAGGCCATGGAACCATAGAACCTAACCATGCTTACTTGGAATATCAGATGGATGACTTCTCTGGCTTTCTTCGTCGGAGGGTTAGTAGTTCATTCAAGTGGGATAGTATTAGAAACTGTCTTAGCCAAACAAATATGTGTGCTGAGTTGAACCAAAGTTTCAGACTGGATCAGGACCTTTTTAATGCACATCTAACTCCTATGCAGTTAGGGTGCTGCAAGCTCCCAATACAATGTGGGTACACATTTGTTATCCCATCCTTTACGGATTGCCTACGATGGAGCAACGACCCAACCCAACTTTGCTACGGTTGTGACTCATGCAAAGTTGGCTTATTGGCTGATCTTAGGAAGGAGTGGAAAACGGCTAATGTGATATTAATCATCACTGTTATAAGTATAATAGTAATATATACAATAGGGTTCTGTGCCTTTATGAATGTCAAAACTGTGACAAAGAATCTTTTTCCCATATTTTTTCTGTTTCCCAATCCTCCACCACAACCGAACAAACTTCACAAAATGGTAAAGTCAGTCGACAAAAATTCTCTGTCCCAAATGGACAATGTTTCTCTATCTCCATCCAATAAAAATGCATTAAATAACAGTGGTTTAAAGTTAGGTACTCAACAATGGACACCATGA 936 0.4028 MALSNNVIGAINFIGVLLSIPIISAGIWLTNGAADSCVKFLQWRLIILGVLILIVALAGFIGAIWRIQCLIIFYLIAMLVLIILVVCLVVFVYMVTIRGHGTIEPNHAYLEYQMDDFSGFLRRRVSSSFKWDSIRNCLSQTNMCAELNQSFRLDQDLFNAHLTPMQLGCCKLPIQCGYTFVIPSFTDCLRWSNDPTQLCYGCDSCKVGLLADLRKEWKTANVILIITVISIIVIYTIGFCAFMNVKTVTKNLFPIFFLFPNPPPQPNKLHKMVKSVDKNSLSQMDNVSLSPSNKNALNNSGLKLGTQQWTP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0462 311 MobiDBLite consensus disorder prediction 289 311 - -
Lal16g0462 311 PRINTS Transmembrane four family signature 6 29 - -
Lal16g0462 311 PRINTS Transmembrane four family signature 38 64 - -
Lal16g0462 311 PRINTS Transmembrane four family signature 65 93 - -
Lal16g0462 311 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 248 - -
Lal16g0462 311 PANTHER TETRASPANIN-8-RELATED 1 248 IPR044991 GO:0009734|GO:0016021
Lal16g0462 311 Pfam Tetraspanin family 6 237 IPR018499 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0462 Lal-Chr16 2855169 2856820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0462 1 247 Miscellaneous Gene Families AT5G46700 60.311 4.14e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0462 - - gmx:100795775 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0462 16 2855169 2856820 Lal16g0462 16 2855169 2856820 ECH
Lal16g0462 16 2855169 2856820 Lal15g0406 15 2751745 2753286 LSH