Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0406 ATGGCACTGAGCAACAATGTCATAGGAGCCATAAACTTCATTGCAGTGCTCCTCTCAATCCCAATCATAGGTGCTGGAATCTGGCTAACAAATGGTGCAGCCGATTCCTGTGTCAAGTTTCTACAATGGCCTATCATCATCTTAGGGGTTCTAATCCTGATTGTTGCTTTAACTGGTTTCATTGGAGCCTTTTGGAGAATCCAATGCCTCCTTATATTCTACCTCATAGCCATGCTTGTGCTTATTGTATTGCTTATTTGCTGTGTGGTTTTTGTGTATATGGTCACTATTAGAGGACATGGTAACATAGAACCTAACCGTGCTTACTTGGAATATCGTATGGATGACTTCTCTGGCTTTCTTAGGAGAAGGGTAAGAAGTTCTTTCAAGTGGGATAGGATTAGAAGCTGTCTTAGCCAAGCAAATATGTGTGCTGAGTTGAACCAGAGTTTCAGAATGGCTCAGGACTTTTTCAACGCACATCTAACTCCTATGCAGTCAGGGTGCTGCAAGCCACCAACTAAATGTGGGTACACATATGTAAACCCAACGTATTGGATTAGTCCCATCAATATGGCTGAAGATATGGATTGCCTACAATGGAGCAACGACCAAACCCAACTTTGCTATGCTTGTGACTCCTGCAAGGCTGGATTATTGGCAAATCTAAGAAAGGAGTGGAAAAGGGCTAATGTTATATTAATCATCACTGTTATTGTTTTAATAGCAATTTATATAATAGGTTGCTGTGCCTTTAGGAATGCCAAAACTGAGGATCTATTTCGCAAATACAAGCAAGGCTATACTTGA 810 0.4099 MALSNNVIGAINFIAVLLSIPIIGAGIWLTNGAADSCVKFLQWPIIILGVLILIVALTGFIGAFWRIQCLLIFYLIAMLVLIVLLICCVVFVYMVTIRGHGNIEPNRAYLEYRMDDFSGFLRRRVRSSFKWDRIRSCLSQANMCAELNQSFRMAQDFFNAHLTPMQSGCCKPPTKCGYTYVNPTYWISPINMAEDMDCLQWSNDQTQLCYACDSCKAGLLANLRKEWKRANVILIITVIVLIAIYIIGCCAFRNAKTEDLFRKYKQGYT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0406 269 Pfam Tetraspanin family 6 251 IPR018499 GO:0016021
Lal15g0406 269 PANTHER TETRASPANIN-8-RELATED 1 268 IPR044991 GO:0009734|GO:0016021
Lal15g0406 269 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 268 - -
Lal15g0406 269 PRINTS Transmembrane four family signature 6 29 - -
Lal15g0406 269 PRINTS Transmembrane four family signature 38 64 - -
Lal15g0406 269 PRINTS Transmembrane four family signature 65 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0406 Lal-Chr15 2751745 2753286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0406 1 269 Miscellaneous Gene Families AT5G46700 72.119 6.47e-138 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0406 - - gmx:100795775 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0406 15 2751745 2753286 Lal15g0406 15 2751745 2753286 ECH
Lal16g0462 16 2855169 2856820 Lal15g0406 15 2751745 2753286 LSH