Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0436 ATGTCCTCTAAATTAACCAAACATGGATCATCATCTATGGTTCGAAAGATCACACAGTTGAGCAGTGATCTCGATCAAGAAGGTGAAAATGTGAGTGTTGGCCTTGCTACCTATACAGTGCACATTCCTCCAACCCCAGATAACCAACCTATGGAGATTTCTCTGGAGAGGTCCACTTCAAGGAGAGTGGTGGACCAGTATGCATCTGGTTCTATTTTTACTGGTGGCTTCAATCAGGTTACGCGAGCGCATTTTATGGAGACAGTTGCCGAATCTGATTCCAGCCACCCTAAGATGACTGACACAAAAGGGTCATCTTGTGCAGTTCCTGGTTGTGGTGGAAAGCTCTTGACTGATGAGAGAGGACTAAATATACTTTATTGTGATTGTGATTACAAGATTTGTATGGATTGTCATAGAGATGCTTTAAGGACTGATGGGGGGATTTGCCCTGGGTGCAAAGAGCCTTTCAAGGATTTAAATATGCAAGATGCTTCTATGGTCAACCACCAGGCGCTGCCCTTGCCACACGGTGATGACGTGCCTAGGATGGAGAGGAGGCTGTCACTGATGAAATCGGGGCCGTTGGCTAGGAGCCAAACTAATGATCAAACTTTGTCGAGGAGCCAAATTAATGAATTTGATCATACTCAATGGTTGTTTGAAACTAAGGGGAGCTATGGATATGGGAACGCTATGTGGCCAAAAGATTCTGAGAATGATGCTAGTTCTGGTTCCGAATGGATGGGTGGTGACCCTAATGCATTCCAGGAAAAGCAGTGGAAACCTTTAACCCGGAAATTGAGTATTTCTGCTGCAATTCTTAGTCCATATCGACTCATAATATTCATCCGGCTGGTGGTGCTTGGTTTTTTTCTAACGTGGAGGGTCCAACATCCCAATGAAGAGGCAGTATGGCTGTGGGGCATGTCTGTGGTTTGTGAAATATGGTTTGCCTTCTCTTGGCTGCTCGACCAGCTTCCTAAGCTCTACCCCATAAATCGTATTGCCGATCTTGATGTCTTAAAAGAGAAGTTTGAAACTCCCAGTCCCCTCAATCCTGCGGGCAAGTCCGATCTTCCTGGAATGGACATTTTTGTGTCAACTGCAGATCCGGAAAAGGAGCCACCACTAGTCACTGCAAATACTATTCTTTCTATTCTAGCTGTTGACTATCCTGTTGAGAAACTTTCATGTTATGTCTCTGATGATGGAGGAGCTCTTCTAACTTTTGAGGCCATGGCAGAGGCTGCAAGTTTTGCCAATTTGTGGGTTCCTTTTTGTCGGAAGCATGACATTGAACCTAGGAACCCAGAATCTTATTTTAGTCTAAAGAGAGATCCATACAAGAACAAGGTACGTTCTGACTTTGTAAGGGATCGCAGGCTGGTAAAGCGAGAGTATGACGAGTTCAAAGTTCGGGTTAATGCCCTTCCTGATTCGATCCGGAGGCGTTCTGATGCTTATAATGCCAGAGAGGAGATCAAAGCTATGAAGCTCTGGAGAGAGAAGGGAACCGATGAACCAAGGGAGAGTATGAAAATTTCTAAAGCTACTTGGATGAATGACGGTACACACTGGCCTGGCACTTGGACAACTAGTGCACCGGAACATTCCAGGGGTGATCATGCCAGTATCGTACAGGTAATGATAAAACCCCCAAATGATGAACCATTGGCAGGCACAACATCAGAATCAACCAACATTGATTTAACTGAAGTTGATATTCGTCTACCTATGCTTGTCTATGTTTCTCGTGAAAAACGACCTGGATACGATCACAACAAGAAAGCTGGGGCCATGAATGCCCTGGTTCGAGCCTCAGCCATAATGTCCAATGGCCCTTTCATACTTAACCTTGACTGTGATCACTATATATATAACTCTGAGGCACTAAGGGAAGGCATGTGCTACATGTTGGATCGTGGTGGGGAAAGTATCTGCTATGTTCAATTCCCTCAAAGGTTTGAAGGAATTGATCCTTCCGATCGCTATGCTAATCATAACACTGTCTTCTTTGATGTAAATATGCGGGCTCTTGATGGACTTCAAGGTCCTGTATATGTTGGCACTGGATGCCTATTCCGAAGGATTGCACTTTATGGATTTGATCCACCAACAGTTAAAGAAGAAACTGGGTGGTTTGGTCGTAAGAATAAGAAATCCTCATCGGTTGCCTCTGTCCCTGAAGTTGGTTATTCTGAGGACCAATCATTGAGAAATGGAAGCACTGATGATGAAGAAATGAGTATTTTTCTTATTCCTAAGGGTTTTGGCAACTCTAGTCTCCTTGTTGACTCAATTAGGTTGGCGGAGTTCCAAGGGCGTCCCCTTGCTGATCATCAATCTATCAAGAACGGGCGACCTCCAGGTGCTCTAGTTCGTCCTCGCGAACCTCTCGATGCTGCAACTGTTTCTGAGGCAATCAGTGTTATCTCATGCTGGTATGAAGATAAGACTGAATGGGGCGATAGGGTTGGATGGATTTATGGATCAGTAACTGAGGATGTTGTGACAGGTTATAGAATGCACAACAGAGGATGGAGGTCTATATATTGTGTGACAAAGAGGGATGCTTTTCATGGCAGTGCTCCAATCAATCTGACTGATCGGCTTCACCAGGTTCTTCGATGGGCAACCGGCTCTGTTGAAATATTCTTTTCACGTAACAATGCTCTTTTAGCTAGCTCTAGAATGATGTTCCTTCAGAGGATTGCTTACCTTAATGTTGGAATTTACCCATTCACTTCCATCTTTCTCATTGTTTACTGCTTCGTTCCTGCACTTTCCCTCTTCACCGGGAAGTTCATTGTCCAGACCCTTCAAATAACCTTCCTAGTTTACCTCTTGGGCATTACAATAACCCTTGTTTTACTTGCTGTTTTGGAGGTCAAGTGGTCTGGTATTGACCTTGAGGAGTGGTGGAGGAATGAGCAATTCTGGTTAATTGGAGGCACAAGTGCCCATCTCGCTGCTGTCCTTCAAGGTCTACTAAAGGTGATAGCTGGCATTGAGATATCATTTACCTTGACATCAAAATCTGGCGGCGATGATGAAAACGATGAATTCGCTGATCTTTATATCCTCAAGTGGACCTCTCTTATGATACCGCCACTCACAATCATGATGATGAATGTGATAGCAATAGCTGTTGCAGTTAGTCGGACCATATACAGCAATGATAATAAGTGGAGTAGTTTGCTTGGAGGCGTGTTCTTCAGTTTTTGGGTGTTGGCTCATCTGTATCCCTTTGCAAAGGGACTTATGGGTAGAAGAGGTAGGACTCCTACTATTGTGTATGTATGGGCTGGTCTAATATCAATCACTATCTCACTCCTTTGGGTTGCTATTAGCCCTCCTTCTGGGAACAGCCAAATTGGAGGGTCATTCCAATTCCCTTGA 3402 0.4436 MSSKLTKHGSSSMVRKITQLSSDLDQEGENVSVGLATYTVHIPPTPDNQPMEISLERSTSRRVVDQYASGSIFTGGFNQVTRAHFMETVAESDSSHPKMTDTKGSSCAVPGCGGKLLTDERGLNILYCDCDYKICMDCHRDALRTDGGICPGCKEPFKDLNMQDASMVNHQALPLPHGDDVPRMERRLSLMKSGPLARSQTNDQTLSRSQINEFDHTQWLFETKGSYGYGNAMWPKDSENDASSGSEWMGGDPNAFQEKQWKPLTRKLSISAAILSPYRLIIFIRLVVLGFFLTWRVQHPNEEAVWLWGMSVVCEIWFAFSWLLDQLPKLYPINRIADLDVLKEKFETPSPLNPAGKSDLPGMDIFVSTADPEKEPPLVTANTILSILAVDYPVEKLSCYVSDDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPESYFSLKRDPYKNKVRSDFVRDRRLVKREYDEFKVRVNALPDSIRRRSDAYNAREEIKAMKLWREKGTDEPRESMKISKATWMNDGTHWPGTWTTSAPEHSRGDHASIVQVMIKPPNDEPLAGTTSESTNIDLTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSEALREGMCYMLDRGGESICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPTVKEETGWFGRKNKKSSSVASVPEVGYSEDQSLRNGSTDDEEMSIFLIPKGFGNSSLLVDSIRLAEFQGRPLADHQSIKNGRPPGALVRPREPLDAATVSEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFHGSAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRMMFLQRIAYLNVGIYPFTSIFLIVYCFVPALSLFTGKFIVQTLQITFLVYLLGITITLVLLAVLEVKWSGIDLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDENDEFADLYILKWTSLMIPPLTIMMMNVIAIAVAVSRTIYSNDNKWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWAGLISITISLLWVAISPPSGNSQIGGSFQFP 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0436 1133 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 49 1131 - -
Lal16g0436 1133 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 560 720 IPR029044 -
Lal16g0436 1133 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 178 IPR013083 -
Lal16g0436 1133 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 49 1131 - -
Lal16g0436 1133 SUPERFAMILY Nucleotide-diphospho-sugar transferases 378 740 IPR029044 -
Lal16g0436 1133 Pfam Cellulose synthase 363 1123 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lal16g0436 1133 SUPERFAMILY RING/U-box 98 162 - -
Lal16g0436 1133 Pfam RING/Ubox like zinc-binding domain 109 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0436 Lal-Chr16 2649860 2658068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0436 15 1133 Glycosyltransferase AT3G03050 73.114 0.0 1712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0436 K20924 - gmx:100813900 1887.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0436 16 2649860 2658068 Lal16g0436 16 2649860 2658068 ECH
Lal16g0436 16 2649860 2658068 Lal15g0380 15 2554668 2560187 LSH