Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0380 ATGTCATATAAATTCCCCAAATTTGGATCATCATCTAAAGGTAGGAAGAATAAACAGGTGAACAGTGATCTTGATCAAGAAGGCGAGAATGTGAATGTTAGCCATGCTACCTATACAGTGCATATTCCTCCAACCCCAGATAACCAACCCATGGAGATTGCTATGGAGAGGTCCCCTTCAAGGAGAGTGGAAGACCAGTATGGATCTAGTTCTATGTTTAATGGAGGTTTCAATCACATTACACAAGCACACTTGAAGGAGAAGGTGACTGAACACCATCTTCAGATGAATGGTGCAAAATGGTTATCTTGTGAAGTTCATGGGTGTGATGGAAAGCTCTTCATTGATGAGGGAGGAATGGATATGCTTGATTGTGACTGTTATGACAAGATTTGTCGGGATTGTTATACAGATGCTTTGAGGGATGGTGAGGGGATTTGCCCTCGGTGCAAAGAGCCTCTCAAGGATTTGGATACGCATGAGGCTTCTATGGTCAATGACCAGGTGTTGCCCTTGCCACCTAGAACTGGGGTGTCCAAGCCGGAGAGGAGTCTGCCGTTGGTGAAATCAGGGCCGTTGGTGAAATCAGGGCCGTTGGTAAAATCGGGGCCGTTGATGAAATCGGGGCCTTTGACAAGGAGCCAACCTAATGATCCAAATTTGTTTATGAGCCAAACTAATGAATTTGATCATGAACAATGGCTTTTTGAAACTAAGGGGAGCTATGGATTTGGGAATGCTATGTGGCCAAAAGATTCTGAGAATGATGGCAGTTCTGTTTCTGATTGGATGGCTGGTGATCCTAATGCCTTCCAGGAAAAACAGTGGAAACCTTTGACCAAGAAAGTGAAAATTTCTGCTGCAATTCTGAGTCCATATCGGCTCATAATATTCATTCGGTTGGTGATGCTTACTTTTTTTCTAATATGGAGGGTCCGACACCCCAATGATGACGCAAAATGGTTGTGGGGCATGTCTGTGGTTTGTGAAATTTGGTTTGCCTTCTCTTGGCTGCTTGATCAGCTTCCTAAGCTTTACCCGATAAATCGTTTTGCTGATCTTGATGTCTTAAAAGAAAAGTTTGAAACTCCTAGCCTCCACAATCCTGCTGGCAAGTCTGATCTTCCAGGAGTAGACATTTTTGTGTCAACTGCAGATCCAGAAAAAGAACCCCCACTTGTCACTGCAAACACTATTCTTTCTATTCTAGCTGTTGATTATCCTGTTGAGAAACTTTCATGTTATGTCTCTGATGATGGAGGCGCACTTCTAACTTTTGAGGCCATGGCAGAGGCTGCAAGTTTCGCTAATGTGTGGGTTCCTTTTTGTCGGAAGCACGATATTGAACCTAGGAACCCAGAATCTTATTTTAGTCTAAAGAGAGATCCCTACAAGAACAAGGTACGGTCTGACTTTGTAAGGGATCGCAGGCAGGTAAAGCGAGAGTATGAGGAGTTCAAGGTCCGGGTTAATGCCCTTCCTGATTCGATGCGGAGGCGTTCTGATGCTTATAATGCTAGAGAGGAGATCAAAGCTATGAAGCTCTGGAGGGAGAATGGAAACAATGAACCAATGGAGAATGTGAAATTTCCTAGAGGTACTTGGATGACTGATGGTACACACTGGCCAGGCACTTGGACAACTAGTGCACCAGAGCATTCTAAGGGCGACCATACCAGTATCATACAGGTAATGATAAAACCCCCGAGCGATGAACCATTGGCAGGCAAAACATCAAATTCAACCGACATTGATTTAACTGAAGTTGATGTTCGTCTTCCAATGCTTGTCTATGTTTCTCGTGAAAAAAGACCTGGATATGATCACAACAAGAAGGCTGGGGCCATGAATGCCCTGGTTCGAGCCTCAGCCATCATGTCCAATGGCCCTTTCATACTTAACCTTGATTGTGATCATTACATTTATAACTCTGAGGCACTAAGGGAAGGCATGTGCTACATGATGGACAGCGGTGGGGAAAAGCTTTGCTACATTCAATTCCCTCAAAGGTTTGAAGGAATTGATCCTTCTGATCGATATGCCAACCGTAACACTGTCTTCTTTGATGTCAATATGCGGGCTCTCGATGGACTTCAAGGTCCAGTATATGTTGGCACAGGATGCCTATTTCGAAGGACTGCATTGTATGGATTTGATCCACCAAGGGATAAAGAAGAAACTGATTGCTTTGGTCGTAAGAAGAAATCCAAATCAGTTTCCTCTGTCCCCGAAGCTAGTGATGTTGAGGACCAGTCATTGAGGAACGACAACACTGATGACGAAGACATGAACATCGCTCTTATTCCTAAGAGTTTTGGCAACTCAAATATCCTTATTGACTCAATCAGGTTGGCGGAGTTTCAAGGGCGTCCCCTTGCTGATCACCACTCTATCAAATATGGACGAGCTCCAGGTGCTCTAATCGGTCCCCGCGAACCTCTCGATGCTACAACTGTTGCTGAGGCAATCAGTGTGATCTCATGCTGGTATGAAGATAAGACTGAATGGGGTGATAGAGTTGGATGGATTTATGGATCTGTAACTGAAGATGTCGTGACAGGTTATAGAATGCACAATAGAGGATGGAGGTCTATATATTGTGTGACCAAGAGGGATGCCTTCCGTGGCAGTGCTCCAATCAATCTGACTGATCGGCTTCATCAGGTTCTTCGTTGGGCTACCGGCTCGGTTGAAATATTCTTTTCACGTAACAATGCTCTTTTAGCTAGCTCTAGAATGATGTTCTTGCAGAGAATTGCTTACCTTAATGTTGGAATTTACCCATTCACTTCCATCTTTCTCATTGTTTACTGCTTCGTTCCTGCACTTTCCCTCTTCACTGGTCAGTTCATTGTCCAGACCGTTCAAATAACCTTCCTAATTTACCTCCTGGGCATCACCGTGACCCTCGTTTTACTGGCCATTCTGGAGATCAAATGGTCTGGTATTGATCTTGAAGAGTGGTGGAGGAATGAGCAATTCTGGTTGATTGGAGGTACAAGTGCCCATATTGCTGCTGTTTTCCAAGGTCTACTAAAGGTGATTGCTGGCATCGAGATTTCATTCACACTGACATCAAAATCCGGCGGCGATGATGTAAACGATGAATTCGCCGATCTTTATATCCTGAAATGGTCCTCTCTCATGATACCACCACTGACAATCATGATGGTCAATGTGATAGCGATAGCGGTAGCAGCTATTCGGACAATATACAGCAATAATAGTCATGGATGGAGCACTTTGCTTGGAGGTGTGTTCTTCAGTTTTTGGGTGTTAGCTCATTTGTATCCCTTTGCAAAAGGACTTATGGGTAAAAGGGGAAAAAGTCCTACTGTTGTGTATGTATGGGCAGGTCTAATATCAATCACTATCTCACTCCTTTGGGTTGCTATTAGTCCTCCATCTGGGAGCACTGAAATTGGAGGGTCATTCCAATTCCCTTGA 3447 0.441 MSYKFPKFGSSSKGRKNKQVNSDLDQEGENVNVSHATYTVHIPPTPDNQPMEIAMERSPSRRVEDQYGSSSMFNGGFNHITQAHLKEKVTEHHLQMNGAKWLSCEVHGCDGKLFIDEGGMDMLDCDCYDKICRDCYTDALRDGEGICPRCKEPLKDLDTHEASMVNDQVLPLPPRTGVSKPERSLPLVKSGPLVKSGPLVKSGPLMKSGPLTRSQPNDPNLFMSQTNEFDHEQWLFETKGSYGFGNAMWPKDSENDGSSVSDWMAGDPNAFQEKQWKPLTKKVKISAAILSPYRLIIFIRLVMLTFFLIWRVRHPNDDAKWLWGMSVVCEIWFAFSWLLDQLPKLYPINRFADLDVLKEKFETPSLHNPAGKSDLPGVDIFVSTADPEKEPPLVTANTILSILAVDYPVEKLSCYVSDDGGALLTFEAMAEAASFANVWVPFCRKHDIEPRNPESYFSLKRDPYKNKVRSDFVRDRRQVKREYEEFKVRVNALPDSMRRRSDAYNAREEIKAMKLWRENGNNEPMENVKFPRGTWMTDGTHWPGTWTTSAPEHSKGDHTSIIQVMIKPPSDEPLAGKTSNSTDIDLTEVDVRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSEALREGMCYMMDSGGEKLCYIQFPQRFEGIDPSDRYANRNTVFFDVNMRALDGLQGPVYVGTGCLFRRTALYGFDPPRDKEETDCFGRKKKSKSVSSVPEASDVEDQSLRNDNTDDEDMNIALIPKSFGNSNILIDSIRLAEFQGRPLADHHSIKYGRAPGALIGPREPLDATTVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRMMFLQRIAYLNVGIYPFTSIFLIVYCFVPALSLFTGQFIVQTVQITFLIYLLGITVTLVLLAILEIKWSGIDLEEWWRNEQFWLIGGTSAHIAAVFQGLLKVIAGIEISFTLTSKSGGDDVNDEFADLYILKWSSLMIPPLTIMMVNVIAIAVAAIRTIYSNNSHGWSTLLGGVFFSFWVLAHLYPFAKGLMGKRGKSPTVVYVWAGLISITISLLWVAISPPSGSTEIGGSFQFP 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0380 1148 SUPERFAMILY RING/U-box 95 160 - -
Lal15g0380 1148 MobiDBLite consensus disorder prediction 1 30 - -
Lal15g0380 1148 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 50 1146 - -
Lal15g0380 1148 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 50 1146 - -
Lal15g0380 1148 Pfam RING/Ubox like zinc-binding domain 106 153 - -
Lal15g0380 1148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 168 IPR013083 -
Lal15g0380 1148 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 576 721 IPR029044 -
Lal15g0380 1148 Pfam Cellulose synthase 378 1138 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lal15g0380 1148 SUPERFAMILY Nucleotide-diphospho-sugar transferases 393 729 IPR029044 -
Lal15g0380 1148 MobiDBLite consensus disorder prediction 740 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0380 Lal-Chr15 2554668 2560187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0380 14 1148 Glycosyltransferase AT3G03050 70.593 0.0 1656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0380 K20924 - gmx:100813900 1776.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0380 15 2554668 2560187 Lal15g0380 15 2554668 2560187 ECH
Lal16g0436 16 2649860 2658068 Lal15g0380 15 2554668 2560187 LSH