Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0406 ATGGGTTTGCAGGAGGATTTTGAGCAGTATGCTCTGAAAGCCAAGTCTCTGCCAGACACTACAACTAATGAAAACTTGCTTATCATTTATGGATTGTACAAGCAAGCCACTGTTGGACCTGTCAATACTAGTCGTCCTGGAATATTCTACCAGAGGGACAGAGCTAAATGGGATGCATGGAAGGCTGTTGAAGGGAAATCCAAGGAGGAAGCCATGAATGATTACATTACTAAGGTGAAACAGCTGCTGGAAGAAGCTGGCATTGCTGCTTGA 273 0.4432 MGLQEDFEQYALKAKSLPDTTTNENLLIIYGLYKQATVGPVNTSRPGIFYQRDRAKWDAWKAVEGKSKEEAMNDYITKVKQLLEEAGIAA 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0406 90 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 21 39 IPR022408 -
Lal16g0406 90 PRINTS Acyl-coA-binding protein signature 4 19 IPR000582 GO:0000062
Lal16g0406 90 PRINTS Acyl-coA-binding protein signature 21 39 IPR000582 GO:0000062
Lal16g0406 90 PRINTS Acyl-coA-binding protein signature 44 59 IPR000582 GO:0000062
Lal16g0406 90 PRINTS Acyl-coA-binding protein signature 65 82 IPR000582 GO:0000062
Lal16g0406 90 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 3 88 IPR000582 GO:0000062
Lal16g0406 90 SUPERFAMILY Acyl-CoA binding protein 3 85 IPR035984 GO:0000062
Lal16g0406 90 Pfam Acyl CoA binding protein 4 79 IPR000582 GO:0000062
Lal16g0406 90 Gene3D - 1 89 IPR014352 -
Lal16g0406 90 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 1 86 - -
Lal16g0406 90 PANTHER ACYL-COA-BINDING PROTEIN-LIKE 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0406 Lal-Chr16 2473364 2475585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0406 1 90 Acyl Lipid Metabolism Gene Families AT1G31812 68.889 1.19e-42 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0406 K08762 - mus:103982409 161.384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0406 16 2473364 2475585 Lal15g0352 15 2381759 2383393 LSH