Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0352 ATGGAGGAGTTTGAGCTATATGCTCTGAAAGCTAAGTCTCTGCCAGATACTACAACAAATGAAAACTTGCTTATCATTTATGGATTGTACAAGCAAGCCACTGTTGGACCTATCAACACCAGTCGTCCTGGAATGTTCAACCAGAGGGACAGAGCTAAATGGGATGCATGGAAGGCTGTTGAAGGTAAATCTAAGGAGGAAGCGATGAATGATTACATTACTAAGGTGAAACAGCTGCTGGAAGAAGCCGGTATTGCTGTTTGA 264 0.428 MEEFELYALKAKSLPDTTTNENLLIIYGLYKQATVGPINTSRPGMFNQRDRAKWDAWKAVEGKSKEEAMNDYITKVKQLLEEAGIAV 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0352 87 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 1 85 IPR000582 GO:0000062
Lal15g0352 87 Pfam Acyl CoA binding protein 2 76 IPR000582 GO:0000062
Lal15g0352 87 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 2 83 - -
Lal15g0352 87 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 18 36 IPR022408 -
Lal15g0352 87 Gene3D - 1 86 IPR014352 -
Lal15g0352 87 SUPERFAMILY Acyl-CoA binding protein 2 82 IPR035984 GO:0000062
Lal15g0352 87 PRINTS Acyl-coA-binding protein signature 1 15 IPR000582 GO:0000062
Lal15g0352 87 PRINTS Acyl-coA-binding protein signature 18 36 IPR000582 GO:0000062
Lal15g0352 87 PRINTS Acyl-coA-binding protein signature 41 56 IPR000582 GO:0000062
Lal15g0352 87 PRINTS Acyl-coA-binding protein signature 62 79 IPR000582 GO:0000062
Lal15g0352 87 PANTHER ACYL-COA-BINDING PROTEIN-LIKE 2 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0352 Lal-Chr15 2381759 2383393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0352 2 84 Acyl Lipid Metabolism Gene Families AT1G31812 71.084 2.22e-40 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0352 K08762 - cpap:110812046 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0352 15 2381759 2383393 Lal15g0352 15 2381759 2383393 ECH
Lal16g0406 16 2473364 2475585 Lal15g0352 15 2381759 2383393 LSH