Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0333 ATGGCCCCTTCATCTGATCCTATCTCATCTTCTTATGTTCCTATCCCAGGTGGACCCCACAACGATGAATCTCCGGTGTTTGAGCCTCCTCGTAGGCGCGTGAAAAAAGTGGTTGTGATCATTTGTGGGTTTCTGGTACTTGTTTCATTGGTGGCATTTATTGGTTACAAGGCTTCAAATGCAGATAATGGAACTAAACCTGAAAATGAACACGTGTCATGTCCATTGTTAACAACTAACGAAGAATCAAGATTAAAAGGTATATCATCTTCGACAAAATGGAAGCCTGTTTCACGTGGTGTGTCTGCAGGGGTGTCAGAGAAATCTAACAAGTTATCCGCTGGAAAAAATGGAGAATCGTATCCTTGGAATAACAGCATGCTCTCATGGCAGAGAACAGCTTTTCATTTCCAACCCGAGAGGAATTGGATGAATGGTCCCATGTACTACAAAGGATGGTACCACTTCTTCTATCAATACAATCCATGCGGTGCAATTTGGGGTAACATGATAGTATGGGGACACGCTGTGTCAAGGGACATGATCCATTGGCTTCACCTTCCATTAGCAATGGTTGCTGATCAATGGTATGACAAACACGGTGTATGGACTGGTTCTGCAACCATCTTACCTGATGGCCAAGTAATCATGTTATACACTGGTTCAACCAATGAGTCAGTGCAGGTTCAGAACCTTGCATACCCTGCTGACCCTTCAGACCCTCTTCTTGTGGATTGGGTCAAATACCCTGGAAACCCTGTCCTGTTCCCACCACCGGGCATTGGAGCCAAGGATTTTCGTGACCCCACCACAGCTTGGCTCACCTCAGAAGGGAAATGGCGCATTACAATAGGGTCTAAGCACAATAAAACAGGCATTGCCTTGGTATATGAAACCCAAGACTTTAAGACCTTTGATCTTATAGATGGTTTGTTCCATGCTGTGCCAGGCACTGGCATGTGGGAGTGTGTAGACTTTTACCCTGTGTCTAGGAAGGTTGATAATGGTTTAGATACTTCTATTACTGGTGTTGATGTGAAGCATGTGGTGAAGGTTAGCTTGGATGATGACAGACATGATTACTATGCATTGGGGAGTTATGATGAGAAGAATGTTAAGTTTATACCAGATAATTTCAAAAATGATGTTGGTATTGGGTTGAGGTATGATTATGGCATTTTTTATGCTTCAAAGACATTTTATGATCATAATAAAGGGAGAAGAGTGTTGTGGGGTTGGATTGGAGAGTTAGACAGCGAATATGCTGATATAGCCAAAGGTTGGGCATCAGTTCAGAGTATTCCAAGAACAGTGACCCTTGACAAGAAGACCGGTAGCAACTTACTTCAATGGCCTATTGAGGAAGTGAAGAGTTTGAGATTGAGAAGCGATGAGTTCAAAAACCTCACGGTGCAGGCAGGGTCAACAGTCTCACTAGACATTGGAACAGCCACCCAGTTGGACATTGAAGCTGAGTTTGAGATAGATAAAGAAGCCTTGCAGAATACATCCCAATCCAATGTAGAGTACAAATGCAGCACCAGTGGTGGTGCATCTCAACGCGGTGCCTTAGGACCTTTTGGCCTTCTAGTTCTAGCTGATGATGATCTTTCTGAATATACTCCTGTCTACTTCTATGTTGTTAAAGGAAGTGATGGACTTCTTAAGGCTTCCTTCTGCTCTGACCAGTCAAGGTCTTCTTTTGCAAATGATGTTAATAAACAAATCTTTGGAAGCATTGTTCCAGTGCTCAAAAACGAAAAGTTGTCTGTAAGAATATTGGTGGATCATTCTATAGTTGAAAGTTTTGCTCAAGGTGGAAGAACAAGTGTGACATCCCGGGTTTACCCAACAAGAGCAATCTATGGAGCTGCTCGGTTGTTCTTGTTCAACAATGCTACTGAGGCTGTTGTTACTGCCTCAGTCAATGTTTGGCAGATGAATTCTGCATTCATTCACCCATTCCAATCAGACCAGAAGAGTTAG 1986 0.4305 MAPSSDPISSSYVPIPGGPHNDESPVFEPPRRRVKKVVVIICGFLVLVSLVAFIGYKASNADNGTKPENEHVSCPLLTTNEESRLKGISSSTKWKPVSRGVSAGVSEKSNKLSAGKNGESYPWNNSMLSWQRTAFHFQPERNWMNGPMYYKGWYHFFYQYNPCGAIWGNMIVWGHAVSRDMIHWLHLPLAMVADQWYDKHGVWTGSATILPDGQVIMLYTGSTNESVQVQNLAYPADPSDPLLVDWVKYPGNPVLFPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKHNKTGIALVYETQDFKTFDLIDGLFHAVPGTGMWECVDFYPVSRKVDNGLDTSITGVDVKHVVKVSLDDDRHDYYALGSYDEKNVKFIPDNFKNDVGIGLRYDYGIFYASKTFYDHNKGRRVLWGWIGELDSEYADIAKGWASVQSIPRTVTLDKKTGSNLLQWPIEEVKSLRLRSDEFKNLTVQAGSTVSLDIGTATQLDIEAEFEIDKEALQNTSQSNVEYKCSTSGGASQRGALGPFGLLVLADDDLSEYTPVYFYVVKGSDGLLKASFCSDQSRSSFANDVNKQIFGSIVPVLKNEKLSVRILVDHSIVESFAQGGRTSVTSRVYPTRAIYGAARLFLFNNATEAVVTASVNVWQMNSAFIHPFQSDQKS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0333 661 Gene3D Glycosyl hydrolase domain; family 43 140 463 IPR023296 -
Lal16g0333 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 452 651 IPR013320 -
Lal16g0333 661 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 30 656 - -
Lal16g0333 661 MobiDBLite consensus disorder prediction 1 28 - -
Lal16g0333 661 Pfam Glycosyl hydrolases family 32 C terminal 455 646 IPR013189 -
Lal16g0333 661 Gene3D - 464 647 - -
Lal16g0333 661 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 30 656 - -
Lal16g0333 661 SUPERFAMILY Arabinanase/levansucrase/invertase 129 453 IPR023296 -
Lal16g0333 661 Pfam Glycosyl hydrolases family 32 N-terminal domain 136 452 IPR013148 -
Lal16g0333 661 MobiDBLite consensus disorder prediction 88 113 - -
Lal16g0333 661 SMART glyco_32 136 607 IPR001362 GO:0004553|GO:0005975
Lal16g0333 661 CDD GH32_Fruct1-like 142 440 - -
Lal16g0333 661 Pfam Beta-fructofuranosidase, N-terminal domain 11 128 IPR021792 GO:0004564
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0333 Lal-Chr16 2014225 2018243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0333 12 658 Glycoside Hydrolase AT1G12240 61.955 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0333 K01193 - gmx:100798772 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0333 16 2014225 2018243 Lal16g0333 16 2014225 2018243 ECH
Lal16g0333 16 2014225 2018243 Lal15g1344 15 15531669 15538278 PCT
Lal16g0333 16 2014225 2018243 Lal16g1284 16 9055936 9062946 PCT