Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1344 ATGATACATTGGCAACACCTTCCACTAGCAATGGTGAATGATCAATGGTACGACATAAACGGTGTGTGGACTGGTTCTGCCACCGTCTTACCTAATGGTCAAGTCATCATGTTATATACGGGTTCAACCAATGACTCGGTTCAGGTGCAGAACCTTGCCTACCCTGCAGACCCATCTGACCCACTCCTTTTGGATTGGATCAAATATCCGGGTAACCCGGTTCTCTTCCCTCCACCAGGTATTGGTTACAAGGATTTTCGAGACCCTACCACCGCTTGGCTAACCTCTGAAGGAAAGTGGCGCATCACAATAGGATCTAAGCTGAACAAAACTGGCATTGCCTTTGTTTATGACACTGATGACTTCAAAACCTATGAGCTTAAGGAAGGATTTCTTAGGGCTGTGGCAGGAACTGGTATGTGGGAGTGTGTAGATTTCTATCCAGTTTCCAAGATGACTGAAAATGGCTTAGATACATCATTTAATGGTGCTGAAGTGAAGCATGTTGTGAAAGTAAGCTTGGATGATGATAGACATGATTATTATTCAATAGGGAATTATGATGAAAAGAAAGCTAATTTCATACCAGATGATGTTAAAAATGATGTTGGTATTGGACTAAGATATGATTATGGTATATTCTATGCATCCAAGACATTTTATGATCAGAGTAAGGGGAGAAGAGTGTTATGGGGTTGGATTGGTGAATCTGATAGTGAATATGCTGATATTACCAAAGGTTGGGCTTCAGTTCAGAGTATTCCAAGAACAGTGAAGCTTGACAAGAAGACTAGAAGCAATTTACTTCAATGGCCTATTGCTGAGGTGGAGAGTTTGAGGTTGAGAAGCAACCAATTTAAAAATTTGAATGCAAAACCAGGTTCAGTGGTGTCACTAGATATTGAATCAGCCACACAGTTGGACATTGTTGCTGAGTTTGAGATAAATAAGGAAGCCATTGAGAAAACAACTGAGTCCAATGAGGAGTACCAATGCAGTGCTAGTGGTGGAGCTTCAAAACGTGGTGCTTTAGGACCTTTTGGTCTTTTGGTTTTGGCAGATGAGGGGCTATCCGAATATACCCCTGTCTACTTTTATGTTACTAAAGGAATTGATGGTCTTCTTAAGACTTCATTCTGCTCTGATCAATCAAGGTCTTCTTTGGCGAATGATGTTAATAAACAAATCTTTGGAAGTTTTGTTCCAGTGCTTGAAGGTGAAAAGTTGTCTGTAAGGATACTGGTGGACCATTCTATAGTTGAAAGCTTTGCTCAAGGTGGAAGGACATGTATAGCATCAAGAGTTTACCCAACAAGGGCAATCTATGGAGCGTCACGATTGTTCTTGTTCAACAATGCTACTGAGGCCACAGTTAAAGCTTCACTCAAAATTTGGCAAATGAATTCTGCATTTATACACCCTTTCAACCCTGATCAGAACAATTAA 1446 0.4073 MIHWQHLPLAMVNDQWYDINGVWTGSATVLPNGQVIMLYTGSTNDSVQVQNLAYPADPSDPLLLDWIKYPGNPVLFPPPGIGYKDFRDPTTAWLTSEGKWRITIGSKLNKTGIAFVYDTDDFKTYELKEGFLRAVAGTGMWECVDFYPVSKMTENGLDTSFNGAEVKHVVKVSLDDDRHDYYSIGNYDEKKANFIPDDVKNDVGIGLRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEYADITKGWASVQSIPRTVKLDKKTRSNLLQWPIAEVESLRLRSNQFKNLNAKPGSVVSLDIESATQLDIVAEFEINKEAIEKTTESNEEYQCSASGGASKRGALGPFGLLVLADEGLSEYTPVYFYVTKGIDGLLKTSFCSDQSRSSLANDVNKQIFGSFVPVLEGEKLSVRILVDHSIVESFAQGGRTCIASRVYPTRAIYGASRLFLFNNATEATVKASLKIWQMNSAFIHPFNPDQNN 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1344 481 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 272 IPR013148 -
Lal15g1344 481 SUPERFAMILY Arabinanase/levansucrase/invertase 1 273 IPR023296 -
Lal15g1344 481 Gene3D Glycosyl hydrolase domain; family 43 1 283 IPR023296 -
Lal15g1344 481 SUPERFAMILY Concanavalin A-like lectins/glucanases 272 471 IPR013320 -
Lal15g1344 481 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 1 475 - -
Lal15g1344 481 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 475 - -
Lal15g1344 481 SMART glyco_32 1 427 IPR001362 GO:0004553|GO:0005975
Lal15g1344 481 CDD GH32_Fruct1-like 1 260 - -
Lal15g1344 481 Pfam Glycosyl hydrolases family 32 C terminal 275 466 IPR013189 -
Lal15g1344 481 Gene3D - 284 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1344 Lal-Chr15 15531669 15538278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1344 1 476 Glycoside Hydrolase AT1G12240 68.802 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1344 K01193 - gmx:100788844 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1344 15 15531669 15538278 Lal15g1344 15 15531669 15538278 ECH
Lal15g1344 15 15531669 15538278 Lal16g1284 16 9055936 9062946 LSH
Lal16g0333 16 2014225 2018243 Lal15g1344 15 15531669 15538278 PCT