Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0331 ATGCCAATGAAATCAGTCACACATTGTCTACCCCAACTCATGTCAACCGCAACCACACCGCGCCAGGTCGCCGTCATAGGCGCCGGAGCTGCCGGTCTAGTCACCGCACGTGAGCTCCGTCGAGAAGGCCACGGGGTCGTAATATTCGAACGAGGGAGCCAAGTTGGCGGATCATGGGTTTATACTCCAGATGTGGAATCAGACCCGCTTGGATTGGACCCAAACCGGAGCGTGGTCCACTCAAGCCTGTACGATTCACTCCGAACCAATCTGCCTCGGGAGTGTATGGGATTTCGTGATTACCCATTCAGGAAACGAGAGGGGGAAGGAAGAGATTCTAGAAGGTTCCCGAGTCACAGAGAGGTGTTGATGTATTTGCAAGATTTCGCTGTTGCTTTTGAGATCGTTGAATTGGTGAGGTTAGAGACGGAGGTTGTTTTTGCTGGGTTGGGAGAAGGTGGGAAATGGAGGGTCAAATCTCGACCATTGAAATCGATTAGTGAATGTGTGGATGAGATTTACGACGCTGTCGTCATCTGCAATGGCCATTACGTTCAACCTCACATTGCTCATATCCCTGGCATTGATTCATGGCTAGGGAAGCAGATGCATAGCCATAATTATAGGACACCTGAGCCCTTTCAAGATCAAGTCATAGTGCTAATAGGTGGTGCTGCTAGTGCTGTTGATATCTCTCGAGACATCGCCACAGTTGCTAAAGAAGTCCACGTTGCTGATAGGTCAATTGAAGAAGATAAGCTTGGAAAAGTTTTTGGCCATGATAACATGTGGCTTCATTCTATGATTGACAGCGTTCATGAAAGTACAGTGATTTTCCAAGATGGAAAGACAGTTGATGCTGACTTCATTGTACATTGCACAGGGTATAAGTTTGATTTCCCTTTCCTTGAAACCAATGGAGCAGTGACTGTGGATGACAACCGTGTAGGACCACTTTACAAGCATGTTTTCCCACCAGCATTGGCCCCATGGCTTTCATTTGTTGGATTGCCTTGGAAGGTTTTGCCCTTTCCCATGTTTGAACTGCAGAGCAATTGGATAGCTGGAACTTTGTCTAACCGCATTGCACTTCCTTCGAAAGAAGAGATGACCGAAGATATTGAAGAATTTTACTCCTCACAAGAAGCGTCTGGCACACCTAAGCGTTACACTCATAGAATGGCCGATGTTCAGTGGGACTATGATAACTGGATTGCAGATCAATGTGGGTTTCCTGCTATTGAAGAATGGAGAGTGCAAATGTACAAGGCCTCATCTAAGAACAAGCGGGCACAACCAGAGTCTTATCGTGACAAGTGGGAGGATGATGGTTTGGTTCTGCAAGCTCAGCAGGATTTTGCTAATTATATCTGA 1374 0.468 MPMKSVTHCLPQLMSTATTPRQVAVIGAGAAGLVTARELRREGHGVVIFERGSQVGGSWVYTPDVESDPLGLDPNRSVVHSSLYDSLRTNLPRECMGFRDYPFRKREGEGRDSRRFPSHREVLMYLQDFAVAFEIVELVRLETEVVFAGLGEGGKWRVKSRPLKSISECVDEIYDAVVICNGHYVQPHIAHIPGIDSWLGKQMHSHNYRTPEPFQDQVIVLIGGAASAVDISRDIATVAKEVHVADRSIEEDKLGKVFGHDNMWLHSMIDSVHESTVIFQDGKTVDADFIVHCTGYKFDFPFLETNGAVTVDDNRVGPLYKHVFPPALAPWLSFVGLPWKVLPFPMFELQSNWIAGTLSNRIALPSKEEMTEDIEEFYSSQEASGTPKRYTHRMADVQWDYDNWIADQCGFPAIEEWRVQMYKASSKNKRAQPESYRDKWEDDGLVLQAQQDFANYI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0331 457 Gene3D - 191 293 IPR036188 -
Lal16g0331 457 PRINTS Flavin-containing monooxygenase (FMO) signature 21 37 IPR000960 GO:0050660|GO:0050661
Lal16g0331 457 PRINTS Flavin-containing monooxygenase (FMO) signature 45 69 IPR000960 GO:0050660|GO:0050661
Lal16g0331 457 PRINTS Flavin-containing monooxygenase (FMO) signature 203 217 IPR000960 GO:0050660|GO:0050661
Lal16g0331 457 PRINTS Flavin-containing monooxygenase (FMO) signature 230 245 IPR000960 GO:0050660|GO:0050661
Lal16g0331 457 PRINTS Flavin-containing monooxygenase (FMO) signature 280 307 IPR000960 GO:0050660|GO:0050661
Lal16g0331 457 PRINTS Flavin-containing monooxygenase (FMO) signature 345 358 IPR000960 GO:0050660|GO:0050661
Lal16g0331 457 Gene3D - 22 439 IPR036188 -
Lal16g0331 457 SUPERFAMILY FAD/NAD(P)-binding domain 273 445 IPR036188 -
Lal16g0331 457 PIRSF FMO 248 415 IPR000960 GO:0050660|GO:0050661
Lal16g0331 457 PIRSF FMO 19 250 IPR000960 GO:0050660|GO:0050661
Lal16g0331 457 PANTHER DIMETHYLANILINE MONOOXYGENASE 17 457 - -
Lal16g0331 457 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 17 457 - -
Lal16g0331 457 Pfam Flavin-binding monooxygenase-like 21 247 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lal16g0331 457 Pfam Flavin-binding monooxygenase-like 260 401 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lal16g0331 457 SUPERFAMILY FAD/NAD(P)-binding domain 19 248 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0331 Lal-Chr16 1993785 1997344 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0331 - - gmx:100793203 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0331 16 1993785 1997344 Lal16g0331 16 1993785 1997344 ECH
Lal16g0331 16 1993785 1997344 Lal15g0268 15 1831138 1835524 LSH