Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0268 ATGTCAACCGCAATAACACCGCTCCTTGTCGCCGTAATCGGCGCCGGAGCCGCCGGTCTGGTTACCGCACGCGAGCTCCGACGAGAAGGCCACGAGGTTGTAGTATTCGAGCGAGGGAACCAAATTGGCGGGACATGGGTTTATAATCCAGACGTGGAATCAGACCCGCTTGGTTTGGATCCAAACCGGAACGTGATCCACTCGAGCCTGTACGCTTCGCTCCGAACCAATCTGCCTCGGGAATGTATGGGGTTTAGAGATTACCCGTTCAGGAAGCGAGATGAGAAAGGAAGAGATTCTAGAAGGTTCCCGAGTCATAGAGAGGTATTGATGTATTTGCAAGATTTCGCTGCTGATTTCGGAATCGGTGAATTGGTGAGGTTAGAGACAGAGGTTGTGCTTGTTGAATTGGGTGAAGGAGGGAAATGGAGGGTGAAATCTAGACCGTTGAAATCGAAAAATGAATGTGTTGATGAGATTTACGATGCCGTTGTCATTTGCAATGGACATCACGTTCAGCCTCGAAATGCTCATATCCCTGGCATTAATGCATGGCGAGGGAAGCAGATGCATAGCCATAATTATAGGACACCCAAGCCCTTTCAAGATCAAGTTGTAGTTATAATAGGTGGTGCTGCTAGTGCTGCTGATATCTCTAGAGAAATTGCCACAGTTGCTAAAGAAGTACACATTGCTGATAGGTCAATTAAAGAAGATAAGCTCGGAAAAGTGCCTGGCCATGATAACATTTGGCTTCATTCTAAGATTGAGAGCGTTCATGGAAGTACAGTGGTTTTCCAAGATGGAAAGGCACTCAGCGCCGACTTCATTGTACATTGCACTGGGTACAAGTATGATTTCCCTTTCCTTGAAACAAAGGGCGCAGTCACTGTGGATGACAACCGTGTAGGACCACTTTACCAGCATGTTTTCCCACCAGAGTTGGCCCCTTGGCTTTCATTTGTTGGGTTGCCTTGGATGGTTGCTCCCTTCCCCGTGTTCGAACGGCAGAGCAAATGGATAGCTGGAACTTTGTCTAATCGCATTGCACTTCCTTCAAAACAGAAGATGACCGAAGATATTCAAGCATTTTACTCATCACTTGAAGCATCTGGCACACCTAAACGTTACACTCATAAAATGTCCGATCTTCAGTGGGACTACGATAACTGGATATCAGATCAGTGTGGGTTACCTGCTATTGAGGAATGGAGAGTACAAATGTATAATGCCACATCTAAGAACAGGGTCTTGCGTCCGGAGTCCTACCGTGATGAATGGGATGATGCTGACTTGGCTCTACAAGCTCAACAGGATTTTGCTCAGTATTTGATTCACTAA 1341 0.4661 MSTAITPLLVAVIGAGAAGLVTARELRREGHEVVVFERGNQIGGTWVYNPDVESDPLGLDPNRNVIHSSLYASLRTNLPRECMGFRDYPFRKRDEKGRDSRRFPSHREVLMYLQDFAADFGIGELVRLETEVVLVELGEGGKWRVKSRPLKSKNECVDEIYDAVVICNGHHVQPRNAHIPGINAWRGKQMHSHNYRTPKPFQDQVVVIIGGAASAADISREIATVAKEVHIADRSIKEDKLGKVPGHDNIWLHSKIESVHGSTVVFQDGKALSADFIVHCTGYKYDFPFLETKGAVTVDDNRVGPLYQHVFPPELAPWLSFVGLPWMVAPFPVFERQSKWIAGTLSNRIALPSKQKMTEDIQAFYSSLEASGTPKRYTHKMSDLQWDYDNWISDQCGLPAIEEWRVQMYNATSKNRVLRPESYRDEWDDADLALQAQQDFAQYLIH 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0268 446 PIRSF FMO 8 237 IPR000960 GO:0050660|GO:0050661
Lal15g0268 446 PIRSF FMO 236 401 IPR000960 GO:0050660|GO:0050661
Lal15g0268 446 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 10 443 - -
Lal15g0268 446 SUPERFAMILY FAD/NAD(P)-binding domain 250 431 IPR036188 -
Lal15g0268 446 PRINTS Flavin-containing monooxygenase (FMO) signature 8 24 IPR000960 GO:0050660|GO:0050661
Lal15g0268 446 PRINTS Flavin-containing monooxygenase (FMO) signature 32 56 IPR000960 GO:0050660|GO:0050661
Lal15g0268 446 PRINTS Flavin-containing monooxygenase (FMO) signature 190 204 IPR000960 GO:0050660|GO:0050661
Lal15g0268 446 PRINTS Flavin-containing monooxygenase (FMO) signature 217 232 IPR000960 GO:0050660|GO:0050661
Lal15g0268 446 PRINTS Flavin-containing monooxygenase (FMO) signature 267 294 IPR000960 GO:0050660|GO:0050661
Lal15g0268 446 PRINTS Flavin-containing monooxygenase (FMO) signature 332 345 IPR000960 GO:0050660|GO:0050661
Lal15g0268 446 PANTHER DIMETHYLANILINE MONOOXYGENASE 10 443 - -
Lal15g0268 446 SUPERFAMILY FAD/NAD(P)-binding domain 10 235 IPR036188 -
Lal15g0268 446 Gene3D - 10 425 IPR036188 -
Lal15g0268 446 Gene3D - 178 280 IPR036188 -
Lal15g0268 446 Pfam Flavin-binding monooxygenase-like 249 367 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lal15g0268 446 Pfam Flavin-binding monooxygenase-like 10 234 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0268 Lal-Chr15 1831138 1835524 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0268 - - gmx:100793203 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0268 15 1831138 1835524 Lal15g0268 15 1831138 1835524 ECH
Lal16g0331 16 1993785 1997344 Lal15g0268 15 1831138 1835524 LSH