Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0305 GAAAAGCAGAGGGAAAAGAATCTATTTATTTGGGCCGGGCAAGTGAGGCCCAAGAAAAGTGGAAAGGATAGGAGCAAAGGAATAGATAAGGGAATAAGTGAAGGTGTTTGGTTTTACTCAAAGCTCATGGCTTCTTCCCAACTCCTTCTTCAGAGGTTTGTGATACCACAAAATCCGATTGCGAAGGTGGGTTTTGTTTCTTGTTGTCTCACCTCTCGGATAGGTTATCGTAACATCCCCTTCACTTCAATTTCATGGAGTCACAGTGTTCAAAAACATAGCACTGGTTTTGTTGTGAGAGCTGAGTCTGAACCCCAAGAAAATGCCCAAAATGTAGAACAAGAAGAAGAAGAACAAGAAGAAGAAGAACAAGAAGAAGTTTCAGAACCCAAGTCCGCAAGAAAACCTCGAGTGAAGCTTGGAGACATCATGGGGATATTGCATAAAAGAGCAATCGAGGCTTCAGAAAAGGAGAGGGCCACTCCAGATATTAGGACCGGAGATATTGTGGAAATCAAATTGGAGGTTCCTGAGAACAAACGTAGGTTGTCAATCTATAAAGGTATTGTTATCTCTAGACAAAACTCTGGCATTCACACAACTATTCGAATCCGGAGAATTATTGCTGGTGTTGGGGTTGAGATAGTCTTCCCGATTTACTCACCAAATATCAAAGAAATCAAAGTAGTGAGCCACCGCAAGGTCCGGAGAGCAAGATTGTACTATCTACGCCACAAGCTTCCCAGACTCTCCACTTTCAAATGA 765 0.4248 EKQREKNLFIWAGQVRPKKSGKDRSKGIDKGISEGVWFYSKLMASSQLLLQRFVIPQNPIAKVGFVSCCLTSRIGYRNIPFTSISWSHSVQKHSTGFVVRAESEPQENAQNVEQEEEEQEEEEQEEVSEPKSARKPRVKLGDIMGILHKRAIEASEKERATPDIRTGDIVEIKLEVPENKRRLSIYKGIVISRQNSGIHTTIRIRRIIAGVGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRHKLPRLSTFK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0305 254 PRINTS Ribosomal protein L19 signature 148 177 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lal16g0305 254 PRINTS Ribosomal protein L19 signature 207 230 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lal16g0305 254 TIGRFAM rplS_bact: ribosomal protein bL19 152 246 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lal16g0305 254 PANTHER RIBOSOMAL PROTEIN L19 87 254 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lal16g0305 254 SUPERFAMILY Translation proteins SH3-like domain 151 254 IPR008991 -
Lal16g0305 254 PANTHER 50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED 87 254 - -
Lal16g0305 254 MobiDBLite consensus disorder prediction 102 134 - -
Lal16g0305 254 Pfam Ribosomal protein L19 151 248 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lal16g0305 254 Gene3D - 145 253 IPR038657 -
Lal16g0305 254 MobiDBLite consensus disorder prediction 109 126 - -
Lal16g0305 254 Coils Coil 106 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0305 Lal-Chr16 1837192 1843769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0305 K02884 - gmx:100500328 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0305 16 1837192 1843769 Lal23g1239 23 13575093 13580237 LSH