Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0281 ATGGCTGCGGCAACAACCTTGAAAGAAACACTAGGAGATCTGAACAGGGATTCTTTCGTGCCCCTTCTGTCCAAACTGATTGGTGAATCAAAGTATGTACAGAACAATCCACCGGAGCTTATTCCAGAAGAAGACAGGGTAGTGAATCACGTTCTCGATGTCCTCCGACCATTCAGCACCACCACCGGTGGTGGCCCTTTGGTTCTCAACCATGTCACCTATTTTCCCGGCAGAGGTAACCTCATCGTCCAGTACCCTGGAACCGTCCCCGGCAAAATCATCTCCTTTGTCGGTTGTCACATGGATGTCGTAACCGCCGATCCCAACGATTGGGATTTTGATCCGTTTAGTTTGGGTATTGAAGGGGATAAACTTAAGGGTCGTGGAACAACTGATTGTTTGGGACATGTTGCCCTTGTTACAGAACTAATGAGGAAGCTTGGAGAAACCAAGCCTAATTTGAAATCAACTGTTGTTGCTGTTTTTATAGCCAATGAAGAGAATTCTTCTATAACTGGAGTTGGTGTAGATGCACTTGTTAAAGACGCCCTCCTTGATAACCTAAAGCAAGGCCCACTGTTTTGGGTTGACACCGCAGATAAACAACCTTGCATAGGCACTGGTGGTATGATACCTTGGAAACTTCATGTCACAGGGAAGCTCTTTCACAGTGGGTTAGCGCATAAAGCAATAAATTCGCTGGAGCTAGCCATGGAAGCTGTGAAGGAAATCCAGTTGCGATTTTATAAGGACTTCCCACCGCATCCTCAGGAACAGGTCTATGGTTTTGCGACTCCTTCAACCATGAAACCAACCCAATGGAGTTATCCTGGAGGTGGAGTCAACCAAATTCCAGGGGAATGTACTATTTCAGGAGATGTCAGGTTAACTCCATTCTACAATGTGAAGGATGTAATGAATAAGCTGCAAGAATATGTGGATGATATTAATGAAAATATACAGAAGCTAGAAACAAGGGGCCCAGTTTCAAAATATGTCCTGCACGATGAAAACTTAAGGGGAAGTCTTACTCTATCTTTCAATGAGGCAAAATCTGGAGTTGCTTGTGATGTTAATTCCAAAGGTTTCCATGTTTTATGCAAAGCAACTGAGGAAGTGATTGGTCATGTAAAACCTTACTCAATTACTGGGAGTTTGCCCCTCATTCGGGAACTACAGGATGACGGCTTTGATGTTCAAATTTGTGGATATGGTATAATGGCAACTTACCATGCCCAGAATGAGTACTGCCTTTTTACAGATATGTCCCAAGGATACCGTGTGTTTGCCAGCATCATTTCTCAATTGGAAGATTGA 1317 0.4389 MAAATTLKETLGDLNRDSFVPLLSKLIGESKYVQNNPPELIPEEDRVVNHVLDVLRPFSTTTGGGPLVLNHVTYFPGRGNLIVQYPGTVPGKIISFVGCHMDVVTADPNDWDFDPFSLGIEGDKLKGRGTTDCLGHVALVTELMRKLGETKPNLKSTVVAVFIANEENSSITGVGVDALVKDALLDNLKQGPLFWVDTADKQPCIGTGGMIPWKLHVTGKLFHSGLAHKAINSLELAMEAVKEIQLRFYKDFPPHPQEQVYGFATPSTMKPTQWSYPGGGVNQIPGECTISGDVRLTPFYNVKDVMNKLQEYVDDINENIQKLETRGPVSKYVLHDENLRGSLTLSFNEAKSGVACDVNSKGFHVLCKATEEVIGHVKPYSITGSLPLIRELQDDGFDVQICGYGIMATYHAQNEYCLFTDMSQGYRVFASIISQLED 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0281 438 CDD M20_ArgE-related 14 436 - -
Lal16g0281 438 SUPERFAMILY Bacterial exopeptidase dimerisation domain 209 319 IPR036264 -
Lal16g0281 438 PANTHER - 6 438 - -
Lal16g0281 438 SUPERFAMILY Zn-dependent exopeptidases 13 436 - -
Lal16g0281 438 Pfam Peptidase dimerisation domain 205 318 IPR011650 -
Lal16g0281 438 PANTHER ACETYLORNITHINE DEACETYLASE 6 438 - -
Lal16g0281 438 Coils Coil 306 326 - -
Lal16g0281 438 Pfam Peptidase family M20/M25/M40 97 434 IPR002933 GO:0016787
Lal16g0281 438 Gene3D Zn peptidases 10 197 - -
Lal16g0281 438 Gene3D - 209 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0281 Lal-Chr16 1676650 1680817 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0281 K01438 - gmx:100814676 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0281 16 1676650 1680817 Lal16g0281 16 1676650 1680817 ECH
Lal16g0281 16 1676650 1680817 Lal15g0214 15 1464647 1472053 LSH