Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0214 ATGGCTGACTTGAAAGAAACACTTGGGAATCTGAATAGGGATTCCTTCGTACCTCTTTTATCGAAACTAATCGGCGAATCCAAGTATGTACAGAACAACCCACCGGAGCTTATTCCAGAAGAAGACAGGGTGGTAAACCACGTTCTCGATGCCCTCCGACCATTCAGCACCACCACCGGTGGCGGACCCTTGATCCTCAACCACGTCACATATTTTCCCGGAAGAGGCAACCTCATCGTCCAGTACCCTGGAACCGTCCCTGGCAAAATCCTTTCCTTTGTTGGTTGCCACATGGATGTTGTAACCGCTAATCCCAACGATTGGGATTTTGATCCGTTTAGTTTGAGCATTGAAGGGGATAAACTTAAGGGTCGTGGAACAACTGATTGTTTGGGACATGTTGCACTTGTTACAGAACTAATGAAGAAGCTTGGTCAAACCAAGCCTAAATTGAAATCAACCGTGGTTGCTGTTTTTATAGCTAATGAAGAGAATTCTGCTATATCTGGAGTTGGTGTCGATGCGCTTGTTAAAGACGGCCTCCTCAACGACCTAAAGCAAGGTCCACTGTTTTGGGTTGATACTGCAGATAAACAACCTTGTGTAGGCACTGGTGGTATGATACCTTGGAAACTTCATGTTACAGGGAAGCTCTTCCACAGTGGGTTAGCTCATAAAGCTATAAATCCACTAGAGCTAGCCATGGAAGCTCTAAAGGAAATCCAGTTGCGATTTTATAGAGACTTCCCATCGCATCCTCAGGAACAAGTCTATGGGTTTGCGACTCCTTCAACCATGAAACCAACCCAATGGAGTTATCCTGGAGGTGGAGTCAACCAAATTCCAGGGGAGTGTACTATTTCAGGAGATGTCAGGTTAACTCCATTCTACAATGTGAAGAACGTAATGGAGAAGCTGCAAGAATATGTAGACGATATTAATGAAAATATACAGAAGATAGAATCACGGGGTCCAGTTTCAAAATATGTTCTACCTGATGAAAACTTAAGGGGAAGCCTTACTCTAACTTTTGACGAGGCAAGTTCTGGAGTTGCTTGTGACCTTAATTCCAGAGGTTTCCATGTTTTATGCAAAGCAACTGAGGAAGTGGTTGGGCACGTAAAACCTTACTCAATCACTGGGACTTTGCCACTCATCCGGGAACTAAAGGATGAAGGTTTTGATGTTCAGACTTGTGGCTATGGTCTAATGGCAACTTACCATGCCAAGAATGAGTACTGCCTTTTTACAGATATGTCTCAAGGATATGGGGTGTTTGTGAGCATTATCTCTCAATTGGAAGATTGA 1308 0.4388 MADLKETLGNLNRDSFVPLLSKLIGESKYVQNNPPELIPEEDRVVNHVLDALRPFSTTTGGGPLILNHVTYFPGRGNLIVQYPGTVPGKILSFVGCHMDVVTANPNDWDFDPFSLSIEGDKLKGRGTTDCLGHVALVTELMKKLGQTKPKLKSTVVAVFIANEENSAISGVGVDALVKDGLLNDLKQGPLFWVDTADKQPCVGTGGMIPWKLHVTGKLFHSGLAHKAINPLELAMEALKEIQLRFYRDFPSHPQEQVYGFATPSTMKPTQWSYPGGGVNQIPGECTISGDVRLTPFYNVKNVMEKLQEYVDDINENIQKIESRGPVSKYVLPDENLRGSLTLTFDEASSGVACDLNSRGFHVLCKATEEVVGHVKPYSITGTLPLIRELKDEGFDVQTCGYGLMATYHAKNEYCLFTDMSQGYGVFVSIISQLED 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0214 435 Pfam Peptidase family M20/M25/M40 94 431 IPR002933 GO:0016787
Lal15g0214 435 Pfam Peptidase dimerisation domain 203 315 IPR011650 -
Lal15g0214 435 Coils Coil 303 323 - -
Lal15g0214 435 Gene3D Zn peptidases 10 195 - -
Lal15g0214 435 PANTHER - 3 435 - -
Lal15g0214 435 PANTHER ACETYLORNITHINE DEACETYLASE 3 435 - -
Lal15g0214 435 CDD M20_ArgE-related 11 433 - -
Lal15g0214 435 Gene3D - 206 322 - -
Lal15g0214 435 SUPERFAMILY Zn-dependent exopeptidases 10 433 - -
Lal15g0214 435 SUPERFAMILY Bacterial exopeptidase dimerisation domain 206 316 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0214 Lal-Chr15 1464647 1472053 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0214 K01438 - zju:107430501 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0214 15 1464647 1472053 Lal15g0214 15 1464647 1472053 ECH
Lal16g0281 16 1676650 1680817 Lal15g0214 15 1464647 1472053 LSH